| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BR0401 |
|---|
| Symbol | |
|---|
| ID | 1166062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella suis 1330 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004310 |
|---|
| Strand | + |
|---|
| Start bp | 404059 |
|---|
| End bp | 405081 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637329348 |
|---|
| Product | polyprenyl synthetase family protein |
|---|
| Protein accession | NP_697432 |
|---|
| Protein GI | 23501305 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTGG GTGTGGTTCT GAATCTCGAC GGTAAAATGA AGCAGGAAGG ATCGGTGCAG
CCGCTGGTCG ACCTCACCAG GGCCGATATG GCGCGCGTGA ACGAGTTGAT CCTGTCCCGC
GCGGGGTCCG ATGTCGAAAT GATACCGGAG GTTGCCAACC ACCTCATTTC ATCCGGCGGC
AAGCGCCTGC GCCCGATGAT GACCCTGGCC TCCGCCCGCA TGTTCGGCTA TGAGGGCGAT
GGCCATGTGC GCCTTGCAAC CTCGGTCGAA TTCATGCACA CGGCGACCCT CCTGCACGAT
GATGTGGTCG ATGAAAGCGA CCTGCGCCGC GGCAAGAGCA CGGCGCGCAC GATCTGGGGC
AACCAGGCCA GTGTTCTCGT CGGCGATTTC CTGCTGGGTC AGGCGTTCAA GATGATGGTC
GATGTCGGCT CGTTCGATGC GCTCGACGTG CTGGCCACCT CCGCCTCCAT CATTGCGGAA
GGCGAGGTGA TGCAGCTTGC CGCAGCCAAG AACATGGAAA CCACCGAAGA CGAATATCTG
GCAGTCATCA AGGCGAAGAC TGCCGCGCTC TTTTCAGCGG CCGCGGAAGT GGGGCCGATC
ATTGCCGGCG CGCAACGCTC CGACCGCGCG GCCCTGCGCG ATTACGGCCT CAATCTGGGC
CTTGCTTTCC AGCTTGTTGA CGATGCGCTT GATTATGGCG GTTCGGCTGC CGATCTCGGC
AAGAATACCG GCGACGATTT CCGCGAAGGC AAGATCACGC TTCCCGTCAT CCTCAGCTAT
CGCCGTGGCA CCGACGAGGA GCGCGCTTTC TGGAAAGGGG CTATCGAAGG CGGCGCGAGC
TACGACGCTT CCTTGCAGAA GGCAATCGGC CTGATGATGA AACACGGCGC GATTGCCGAC
ACGGTGCAGC GCGCCCGCCA TTTCGGCGAG ATCGCACGCG ATGCGCTGGC CCCGCTCAAG
GCGTCGCCGC AAAAGGATGC GCTGATCGAG GTGGTCGATT TCTGCATCAG CCGTGTCAAT
TGA
|
|---|
| Protein sequence | MALGVVLNLD GKMKQEGSVQ PLVDLTRADM ARVNELILSR AGSDVEMIPE VANHLISSGG
KRLRPMMTLA SARMFGYEGD GHVRLATSVE FMHTATLLHD DVVDESDLRR GKSTARTIWG
NQASVLVGDF LLGQAFKMMV DVGSFDALDV LATSASIIAE GEVMQLAAAK NMETTEDEYL
AVIKAKTAAL FSAAAEVGPI IAGAQRSDRA ALRDYGLNLG LAFQLVDDAL DYGGSAADLG
KNTGDDFREG KITLPVILSY RRGTDEERAF WKGAIEGGAS YDASLQKAIG LMMKHGAIAD
TVQRARHFGE IARDALAPLK ASPQKDALIE VVDFCISRVN
|
|---|
| |