Gene BR0397 details

Gene Information

• Locus tag: BR0397
• Symbol: nhaA
• ID: 1166058
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brucella suis 1330
• Kingdom: Bacteria
• Replicon accession: NC_004310
• Strand: -
• Start bp: 401319
• End bp: 402500
• Gene Length: 1182 bp
• Protein Length: 393 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637329344
• Product: pH-dependent sodium/proton antiporter
• Protein accession: NP_697428
• Protein GI: 23501301
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3004] Na+/H+ antiporter
• TIGRFAM ID: [TIGR00773] Na+/H+ antiporter NhaA

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.311183
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCATA GCCCGCAATC CGCTCGCCCC GTTTCCATCA TGCGACGTTT TCTGGACAGC 
GAAGCCGCTG GCGGCATAAC GCTCATGGCT GCAGCGGCGC TTGCCCTCAT CGTTGCAAAT 
TCGCCCTTTG CCCAGACCTA TTTCGATGCG TTGCATCTAT ATATCGGCCC GCTCAGCCTT 
GCGCACTGGA TCAACGATGC GCTGATGGCA ATATTCTTTT TGCTGGTGGG ACTGGAAATC 
AAGCGCGAGA TGCTGGACGG GCAGCTCGCA AGCTGGCCCA ACCGCATGTT GCCGGGCATT 
GCGGCAGCGG GCGGCGTCAT TTTGCCTGCA ATCATTTTCG CGGTTCTCAA CCATGACAAT 
CCGGCCAAGC TGCGCGGCTG GGCGGTGCCA TCGGCAACCG ATATCGCCTT TGCGCTCGGC 
GTACTGTCGC TTCTGGGTTC GCGCGCGCCG TCAAGCCTCA AGGTGTTTCT GGCAACGCTT 
GCCATTCTTG ACGACCTTGC CGCCGTGGTC ATCATCGCAA TCTTCTACAC GGCTGAAATT 
TCCATGCCCT ATCTGGGCGC GGCCTTTATC ACCGCCGCGG TCCTCTTTGT CATGAACCGC 
ATGGGCGTGG TGAAGCTCCT GCCTTATCTG ATCAGCGCTG TGATCCTCTG GTTCTTCGTC 
TTCAATTCCG GCGTTCATGC CACGGTTGCC GGTGTTGTCG CAGCCCTCAT GATCCCGCTA 
AAACCTGCAC CCGGCAGACC CGACGACATG ACCTCGCCCC TGCACAAGCT GGAACATGCA 
CTGGCCAAGC CCGTTGCCTT CATCGTCGTG CCGATCTTCG GCTTTGCCAA TGCGGGCATT 
TCCTTCAAGG GGCTTGAGGC TTCCGTCCTG GGCGACACGC TGACACTCGG CATCCTGCTC 
GGCCTTTTCC TCGGCAAGCA GTTCGGCGTC TTCGGCGCGG CCTGGCTCGC CATCAAAACG 
GGGCTTGCCG AAAAGCCGAT GGGCGCAAGC TGGGTTCAGC TTTACGGCGT CGCCATTCTT 
TGCGGCATCG GCTTTACGAT GAGCATCTTC ATCGGCCTTC TCTCCTTCCC GTCCGACCTC 
ATGCAGACGG AAACGAAGAT CGGTGTCCTT TCCGGCTCCG CCCTTTCGGC CATTTGCGGC 
TATCTCCTGT TGCGGGCGGC GGCCAGACCA AAGCGCGGCT AA 

 

Protein sequence

MNHSPQSARP VSIMRRFLDS EAAGGITLMA AAALALIVAN SPFAQTYFDA LHLYIGPLSL 
AHWINDALMA IFFLLVGLEI KREMLDGQLA SWPNRMLPGI AAAGGVILPA IIFAVLNHDN 
PAKLRGWAVP SATDIAFALG VLSLLGSRAP SSLKVFLATL AILDDLAAVV IIAIFYTAEI 
SMPYLGAAFI TAAVLFVMNR MGVVKLLPYL ISAVILWFFV FNSGVHATVA GVVAALMIPL 
KPAPGRPDDM TSPLHKLEHA LAKPVAFIVV PIFGFANAGI SFKGLEASVL GDTLTLGILL 
GLFLGKQFGV FGAAWLAIKT GLAEKPMGAS WVQLYGVAIL CGIGFTMSIF IGLLSFPSDL 
MQTETKIGVL SGSALSAICG YLLLRAAARP KRG