| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BR0096 |
|---|
| Symbol | ccmC |
|---|
| ID | 1165753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella suis 1330 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004310 |
|---|
| Strand | + |
|---|
| Start bp | 101501 |
|---|
| End bp | 102286 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637329049 |
|---|
| Product | heme exporter protein CcmC |
|---|
| Protein accession | NP_697137 |
|---|
| Protein GI | 23501010 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
|---|
| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGACG CCGCAAAAAC TGCAAGCTGG CTTGATCTGG CCAATCCCAC ACGTTTCCTT
GCCTTTGCGG GCAGGGTTGT GCCCTGGCTT GGGCTGGCAT CGGCAATCTT TCTTGCTGTC
GGGCTTTACA TGGTTTTCCT GTCGCCGGAC GATTATCAGC AGGGCAGCAC GGTGCGCATC
ATGTATATTC ATGTGCCTTT CGCGTGGCTC TCCATGATGT GCTATTCGAT CATGGCTGTT
TCCTCGCTTG GCACACTGGT CTGGCGGCAC CCGCTGGCCG ATGTTTCGGT GCGTGCCGCG
GCTCCCATCG GCGCGGTGTT CACGGCACTG GCGCTTGCCA CCGGCTCGCT ATGGGGCAAG
CCCATGTGGG GAACATGGTG GGTATGGGAT GCGCGGCTCA CCTCGGTTTT TGTCCTCTTT
CTCATGTATC TCGGCATTAT TGCGCTCTCG CGCGCCATGG ATGACCCGGC AAGAAGCGCA
AAGCCCGTAG CAGTGCTCAC GCTCGTCGGC TTCATCAATG TGCCGATCAT CAAATTCTCG
GTCGATTGGT GGAATACGCT GCATCAGCCT GCTTCCGTAT TTCGTCTCGA CGGCCCAACC
ATCGACGGCT CCATGCTGCG CCCGCTTTTC GTGATGGCTA TCGGCTTCAC GCTTTTGTTC
TTCACGCTGC ATATGATGGC GATGCGTAAT GAAATCTGGC GCCGCCGCGT GGCGTCGATG
AAAAAACTGG CGGCTCGCAA TGTGGACCGC AATCGCGCCG GGCAGGTGGA GGAGGGCGCG
CTATGA
|
|---|
| Protein sequence | MKDAAKTASW LDLANPTRFL AFAGRVVPWL GLASAIFLAV GLYMVFLSPD DYQQGSTVRI
MYIHVPFAWL SMMCYSIMAV SSLGTLVWRH PLADVSVRAA APIGAVFTAL ALATGSLWGK
PMWGTWWVWD ARLTSVFVLF LMYLGIIALS RAMDDPARSA KPVAVLTLVG FINVPIIKFS
VDWWNTLHQP ASVFRLDGPT IDGSMLRPLF VMAIGFTLLF FTLHMMAMRN EIWRRRVASM
KKLAARNVDR NRAGQVEEGA L
|
|---|
| |