Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BR0068 |
Symbol | |
ID | 1165725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brucella suis 1330 |
Kingdom | Bacteria |
Replicon accession | NC_004310 |
Strand | + |
Start bp | 72078 |
End bp | 72734 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637329022 |
Product | hemolysin III family channel protein |
Protein accession | NP_697110 |
Protein GI | 23500983 |
COG category | [R] General function prediction only |
COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGTAA GACTGCCACA TCCAGTCAAA TGGAAATATG ACCGGGCCGA ATTGTGGGCC GATGGCGTCA TCCATGTGCT GGGTGTCGGG CTGGCGCTTG CCGGTGCCAT TGCCATGCTG TTCTATTTCC TGCCGAACAT GCCGGCTGTG ACTTCGATTT CATCCGGCGT CTATCTGGCG AGCCTCGTTG CCGCGCTCGG AATTTCCGCC GTTTACAATA TCTGGCCGGT CTCCCCGACC AAATGGTTCC TGCGCCGTTT CGACCATTCG GCGATTTATT TGCTGATTGC CGGAACCTAC ACGCCTTTTG CCATACATAT GGGCGACCGC GCGCTGCCCC TGCTGCTGTT CGTGTGGAGC GTGGCTTTCG TCGGCATCAT GCTCAAACTG TTCATGCCGG GGCGTTTTGA CCGGCTGTCG ATCCTGCTTT ATCTGGCGCT CGGCTGGAGC GGCGTCATGG TCTATGACAC CATGGTGCAA TCGCTGCCAC CCGCCGTCTT CTGGCTGATT GCGGCTGGCG GCATGGTCTA TTCGCTGGGC GTCATCTTCC ATGTCTGGGA ACGCCTGCGG TTTCAGAACG CCATCTGGCA CGGTTTTGTC GTGGTGGGCG CGGCGCTGCA TTATTGCGCG GTGTTTTTTG TCGGCGCGTG GAATTAA
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Protein sequence | MNVRLPHPVK WKYDRAELWA DGVIHVLGVG LALAGAIAML FYFLPNMPAV TSISSGVYLA SLVAALGISA VYNIWPVSPT KWFLRRFDHS AIYLLIAGTY TPFAIHMGDR ALPLLLFVWS VAFVGIMLKL FMPGRFDRLS ILLYLALGWS GVMVYDTMVQ SLPPAVFWLI AAGGMVYSLG VIFHVWERLR FQNAIWHGFV VVGAALHYCA VFFVGAWN
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