Gene BR0003 details

Gene Information

• Locus tag: BR0003
• Symbol: recF
• ID: 1165659
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brucella suis 1330
• Kingdom: Bacteria
• Replicon accession: NC_004310
• Strand: +
• Start bp: 3878
• End bp: 5032
• Gene Length: 1155 bp
• Protein Length: 384 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637328957
• Product: recombination protein F
• Protein accession: NP_697046
• Protein GI: 23500919
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1195] Recombinational DNA repair ATPase (RecF pathway)
• TIGRFAM ID: [TIGR00611] recF protein

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGAAGCAA AAGATCACAT AGAACGCCGC CCGGATCGCG TTTCGATCCG GCGGCTCAAG 
CTTGTCAATT TCCGCAACTA TGCAGAATTG TCGCTGCCGC TGGGACCGGG CCATGTGGTG 
CTGACGGGCG AAAACGGCTC CGGCAAAACC AATCTCATCG AAGCCATTTC CTTCCTGTCG 
CCGGGGCGGG GCCTGCGTCG CGCCGCCTAT GACGATGTGG CGCGTGCCAA TGCCGAAGGC 
GGTTTTGCGA TCCACGCCGC ACTCGACTGC ATGATTTATG GCGACGCGGA AATCGGAACC 
GGCACGGCGG GCGGCGGCGA AGGCGGGCGC AAGGTGCGTA TTAACGGTAT TGCCGCTTCT 
GCCGATGATC TTCTCGATTA TGCGCGCATT CTCTGGGTGG TGCCATCCAT GGATGGGCTT 
TTCACCGGCG GCGCTTCCGA CCGGCGGCGT TTTCTCGACC GTATGGTGCT CGCCATCGAT 
ACCGCCCATG GCAAGCGGGT GCTTGATTAT GAAAAAGCAA TGCGCAGCCG CAACCGGCTG 
TTGAATGATG GCAGCAATGA CGATCAATGG CTGGACGCCA TCGAGAACCA GATGGCTGAA 
CTGGGCACGG CCATTGCAGC AGCGCGTGCG CAAGCCATGC GCCTGATTGC GGCGATGATC 
GAACGGCTTC CCGCCGAGGG ACCATTTCCC AAAGCCGATT GCTTTCTGGA AGGGGCGCTG 
GAAAGCCGCA TCGGTGTGGA GGCGGCGCTT GATCTTGAAG AGGATTTTCG CCGTACCCTG 
CGCGATGGCC GCGCGCGCGA CCGGGCGGCA GGCCGCACGC TCGATGGTCC GCATCGCACT 
GACCTGATTG TCCAGCACAG GCCCAAATCC ATGCCGGCCG CACTGTGCTC GACGGGCGAG 
CAGAAGGCGC TTCTGATCGG CCTCATTCTC GCCCATGCAC GGCTGACGGC GGAACTTTCC 
GGCATGGCGC CGATCCTCCT GCTCGATGAA ATTGCGGCGC ATCTCGATAT GGGGCGCCGT 
GCAGCCCTTT TCGGCATTCT CGACGAGCTT GGCGGGCAGG CTTTCATGAC TGGCACCGAT 
CGTGCGCTTT TTGATGCGCT TGCTGGCGAT GCGCAGTTTT TCAACGTGTC GGCCGGGCAA 
TTGACAGGGA TATAA 

 

Protein sequence

MEAKDHIERR PDRVSIRRLK LVNFRNYAEL SLPLGPGHVV LTGENGSGKT NLIEAISFLS 
PGRGLRRAAY DDVARANAEG GFAIHAALDC MIYGDAEIGT GTAGGGEGGR KVRINGIAAS 
ADDLLDYARI LWVVPSMDGL FTGGASDRRR FLDRMVLAID TAHGKRVLDY EKAMRSRNRL 
LNDGSNDDQW LDAIENQMAE LGTAIAAARA QAMRLIAAMI ERLPAEGPFP KADCFLEGAL 
ESRIGVEAAL DLEEDFRRTL RDGRARDRAA GRTLDGPHRT DLIVQHRPKS MPAALCSTGE 
QKALLIGLIL AHARLTAELS GMAPILLLDE IAAHLDMGRR AALFGILDEL GGQAFMTGTD 
RALFDALAGD AQFFNVSAGQ LTGI