Gene SAG1968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG1968 
Symbol 
ID1014778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp1955269 
End bp1956009 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content47% 
IMG OID637317134 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionNP_688955 
Protein GI22538104 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACAGT ATTTTGTAAA TGGCGAAGCA GGTGCCTATG TGACCATCGA GGACAAGGAT 
ACCATCAAGC ACATGTTCAA TGTCATGCGA TTGACAGAAG ATGACCAAGT GGTCTTGGTT
TTTGATGATG CCATCAAGCG TCTGGCAAAG GTGGTGGACA GCTCTGCTCA TCGCTTCCAA
ATTCTAGAAG AGCTAGACAA CAATGTTGAA ATGCCAGTTC AAGTGACCAT TGCCTCAGGT
TTTCCCAAGG GAGACAAGTT GGATTTTGTG ACGCAAAAGG CAACAGAATT GGGTGCTGCG
GCTATCTGGG GATTCCCAGC TGACTGGTCA GTCGTCAAGT GGGACGGCAA GAAACTAGCT
AAAAAAGAAG ATAAGCTGGC AAAAATTGCT CTGGGCGCAG CGGAGCAGAG CAAGCGTAAT
CGTCTTCCTC AGGTTCGTTT ATTTGAGAAG AAGGCTGATT TTCAAGCGGA GCTTGCAGGC
TTTGATAAGA TTTTTATCGC CTATGAAGAG TCTGCCAAGG AGGGTGAATT GTCAGCGCTA
GCCCAGAACT TGCAGACTGT AAAAGCAGGT GACAAGCTCC TCTTCATCTT TGGACCAGAA
GGGGGCATTT CTCCAAAAGA AATCGCAGCT TTTGAAGAGG TTGGAGCTAT CAAGGTGGGC
TTGGGGCCAC GCATCATGCG CACAGAAACA GCGCCGCTCT ATGCTCTAAG TGTTATTAGT
TACTCAGCGG AGTTATTATG A
 
Protein sequence
MQQYFVNGEA GAYVTIEDKD TIKHMFNVMR LTEDDQVVLV FDDAIKRLAK VVDSSAHRFQ 
ILEELDNNVE MPVQVTIASG FPKGDKLDFV TQKATELGAA AIWGFPADWS VVKWDGKKLA
KKEDKLAKIA LGAAEQSKRN RLPQVRLFEK KADFQAELAG FDKIFIAYEE SAKEGELSAL
AQNLQTVKAG DKLLFIFGPE GGISPKEIAA FEEVGAIKVG LGPRIMRTET APLYALSVIS
YSAELL