| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG1960 |
|---|
| Symbol | |
|---|
| ID | 1014770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus agalactiae 2603V/R |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004116 |
|---|
| Strand | - |
|---|
| Start bp | 1948143 |
|---|
| End bp | 1949798 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637317126 |
|---|
| Product | sensor histidine kinase |
|---|
| Protein accession | NP_688947 |
|---|
| Protein GI | 22538096 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5002] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0440591 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAA AAATTTTCCG TACAACTTTA TCTGCTAGTT TGGGAATTGT TTTAGTTACA
ATTTTGATGA TTATGGGATT TCTCTATAAT TACTTCAATC ACATTCAGCG AGAACAGTTG
AGAACACAAA CGGCACTGGC GTCACAAGGA ATTTCCTTTG AAGGTAAAGA TTATTTTGAA
AATCTTAAAA CTTCAAATGT GCGTATTACT TGGGTAGATA ATAAGGGACA AGTGCTTTAT
GATACCCAAT CAGATGCAAA ACATATGAAA AATCACGCCA ATCGTCAAGA AATTAAAGAA
GCTATCAAGA GTGGTTATGG TGAGAGCACG AGGTGGTCAG CGACACTTAC TGAGAAGTCT
ATCTATGCTG CGCAACGTTT AAATAATGGA ACGATAGTTC GTTTATCAGT TGCGCAACAA
ACTATTTTTT ATCTTCTCCT TGGTATGATA AGTCCCTTAG CAATTATCAT CTTACTTGCT
ATTATTTTAT CTGTATTAAT TGCACGATAT ATAGCAAAAA AAGTATCAGA GCCTTTAAAC
AATATTGACT TAGATCATCC TTTATCAAAT GATAGTTACG AGGAGATAAC ACCATTATTA
AGGCGTCTTG ATAGCCATCA GGCTAAGATT CAACATCAAA AACTGTTATT ACAAAAGCGT
CAAAAAGAAT TTGATACCAT TATTTCTAAA ATTAAGGAAG GAATGATTCT TTTAGATGAT
CAAGCAAGAA TCGTTAGTAT CAACGCAGAA GCTTTAAAGT TATTCCAAAT TAATGATGAT
TGGCATGGGC GCTTTATGAT GGAAGTTAGC CGAGATTTAA CTCTCAAAGA CTTAATCGAT
CAAGGACTAA AAGGGAAAAA GAAAGAGGCT AATATTGGCA TTGAAAATAA TCATTACCGC
GTCTTGGTAA GACCAACTAC AGATAACAAC CGAGTAACAG GATTGGTTGT TCTACTGTTT
GATGTGACTG ATCAACTCCA AATGGAACAA CTTCAACGTG AATTTACTGC CAATGTCTCT
CATGAATTGA AAACCCCGCT TCATGTTATT TCTGGTTACT CAGAACTGTT AGCTAATCAA
ATGGTTCCAA ACGAAGAAGT CCCACAATTT GCAGCTAAAA TTCATAAAGA ATCTGAACGA
TTAGTTAAAT TGGTTGAGGA TATTATCAAC CTTTCTCACC TTGATGAACA AGAAAAATTA
CCGCAAGAGA CAGTAAATCT GTATGACTTA ACACAAAAAG TTTTAGAAGG TTTACAAGCT
AAAGCAGATA AGAAGCACAT ACAAATCAAT TTTAATGGAG AAGAAGCTAT TTTGCGAGGG
AATCCAGTTT TATTGAATTC CTTGGTGTAC AACTTGTGTG ACAATGCTAT CACCTATAAC
CATGAGAAAG GTCAAGTAAA TGTGACTTTG AAAAATTCAC CTGATACAAT TACCTTAGAA
GTTAGTGATA CGGGACTAGG CATTGCAGAG AAGGACAAAA AACGTATTTT CGAACGTTTC
TATCGCGTCG ATAAAAGTCG CTCAAAAATA GTTGGGGGGA CTGGTTTAGG TTTGTCTATT
GTAAAGAGTG CTTTAGATTT TCACAATGGT AGTATAAAAG TGGACAGCCA TTTGGGGCAG
GGAACAACAA TGACCGTTTT ACTTCACAAA CAATAA
|
|---|
| Protein sequence | MTKKIFRTTL SASLGIVLVT ILMIMGFLYN YFNHIQREQL RTQTALASQG ISFEGKDYFE
NLKTSNVRIT WVDNKGQVLY DTQSDAKHMK NHANRQEIKE AIKSGYGEST RWSATLTEKS
IYAAQRLNNG TIVRLSVAQQ TIFYLLLGMI SPLAIIILLA IILSVLIARY IAKKVSEPLN
NIDLDHPLSN DSYEEITPLL RRLDSHQAKI QHQKLLLQKR QKEFDTIISK IKEGMILLDD
QARIVSINAE ALKLFQINDD WHGRFMMEVS RDLTLKDLID QGLKGKKKEA NIGIENNHYR
VLVRPTTDNN RVTGLVVLLF DVTDQLQMEQ LQREFTANVS HELKTPLHVI SGYSELLANQ
MVPNEEVPQF AAKIHKESER LVKLVEDIIN LSHLDEQEKL PQETVNLYDL TQKVLEGLQA
KADKKHIQIN FNGEEAILRG NPVLLNSLVY NLCDNAITYN HEKGQVNVTL KNSPDTITLE
VSDTGLGIAE KDKKRIFERF YRVDKSRSKI VGGTGLGLSI VKSALDFHNG SIKVDSHLGQ
GTTMTVLLHK Q
|
|---|
| |