Gene SAG1950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG1950 
Symbol 
ID1014760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand- 
Start bp1938961 
End bp1939452 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content37% 
IMG OID637317117 
ProductPTS system, IIB component 
Protein accessionNP_688938 
Protein GI22538087 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACTC AAATTCGTGT TGACGACCGT TTGATTCACG GGCAAGTGGC AGTTGTATGG 
ACTAAAGAAT TAAATGCACC ACTTTTAGTG GTGGCTAATG ATGAAGCTGC AAAAAATGAA 
ATCACACAGA TGACTCTTAA AATGGCTGTG CCTAATGGCA TGAAATTATT AATCCGTTCA 
GTTGAAGAAT CAATAGCTCT ATTTAAAGAT CCACGTGCAA CTGACAAGCG CATTTTTGTG 
ATTGTCAATT CTGTTAAAGA TGCCTGTACA ATTGCTAAAA ATATAACCGA TTTAGAAGCA 
GTAAACGTCG CTAATGTAGG ACGCTTTGAT AAGTCTGATC CAGCTACAAA AGTCAAACTA 
ACATCAAGTC TCTTATTAAA TACAGAAGAG TTGGAAGCCG CAAAAGAATT AGCCAGCTTA 
CCAGATTTAG ACGTCTTTAA CCAAGTATTG CCTTCAAATA CTAAGGTTAA CTTGAGTCAG 
TTAGTCAAAT AA
 
Protein sequence
MITQIRVDDR LIHGQVAVVW TKELNAPLLV VANDEAAKNE ITQMTLKMAV PNGMKLLIRS 
VEESIALFKD PRATDKRIFV IVNSVKDACT IAKNITDLEA VNVANVGRFD KSDPATKVKL 
TSSLLLNTEE LEAAKELASL PDLDVFNQVL PSNTKVNLSQ LVK