Gene SAG1899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG1899 
Symbol 
ID1014709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand- 
Start bp1880346 
End bp1881212 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content42% 
IMG OID637317067 
ProductPTS system, IIC component 
Protein accessionNP_688888 
Protein GI22538037 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3715] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00676289 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATTA GTATTCTTCA GGCTGTCTTA ATTGGACTGT GGACGGCTTT CTGTTTTAGT 
GGCATGTTGC TTGGCCTCTA TACAAATCGT TGTATCGTTC TCTCTCTAGG CGTTGGTGTT 
ATTTTAGGAG ATATTCAAAC AGCTTTGGCA GTTGGAGCAA TATCTGAACT GGCTTACATG 
GGATTTGGTG TGGGAGCGGG AGGGACAGTT CCTCCAAACC CAATCGGTCC TGGGATTTTT 
GGAACTTTGA TGGCTATTAC AACAGCTGGA ACTAAAGGAA AAATCACACC GGAAGCTGCT 
CTTGCATTAT CAACCCCAAT TGCAGTTGGT ATTCAATTTC TTCAAACAGC AACTTATACT 
GCTTTTGCAG GGGCGCCTGA AACAGCTAAA AAAGCTTTGC AAGCAGGTAA TTTCCGAGGA 
TTTAAAATTG CAGCAAATGG TACAATTTGG GCATTCGCTG GATTGGGATT TGGTTTAGGA 
GTACTGGGTG CTCTTTCAAC GCAAACTTTG ACAGATTTAT TTGCTCTCAT TCCCCCTGTT 
TTGCTTAATG GTCTAACCTT AGCTGGGAAA ATGCTTCCTG CAATTGGTTT TGCGATGATT 
CTCTCTGTAA TGGCTAAAAA AGAACTCATT CCTTATATCC TACTTGGATA TGTTCTAGCT 
GTTTATTTTG GTTTGCCAGT TCTAACTCCA ACAGCAAATG GAGACGGAGT TTTAACATCA 
GTGGCTACTA ACAGTGTGCT TGGGGTTCCA ACTATCGGGG TAGCTATAAT TGCAACAATA 
TTTGCTTTGC TTGATATTTT CAGAAAACCA GCTGCACCTA CTAAAGAAAC TAAGACAGAA 
GGAGACAACC AAGATGACTG GATCTAA
 
Protein sequence
MDISILQAVL IGLWTAFCFS GMLLGLYTNR CIVLSLGVGV ILGDIQTALA VGAISELAYM 
GFGVGAGGTV PPNPIGPGIF GTLMAITTAG TKGKITPEAA LALSTPIAVG IQFLQTATYT 
AFAGAPETAK KALQAGNFRG FKIAANGTIW AFAGLGFGLG VLGALSTQTL TDLFALIPPV 
LLNGLTLAGK MLPAIGFAMI LSVMAKKELI PYILLGYVLA VYFGLPVLTP TANGDGVLTS 
VATNSVLGVP TIGVAIIATI FALLDIFRKP AAPTKETKTE GDNQDDWI