| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG1683 |
|---|
| Symbol | |
|---|
| ID | 1014492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus agalactiae 2603V/R |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004116 |
|---|
| Strand | - |
|---|
| Start bp | 1680408 |
|---|
| End bp | 1681946 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637316852 |
|---|
| Product | immunogenic secreted protein, putative |
|---|
| Protein accession | NP_688674 |
|---|
| Protein GI | 22537823 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3942] Surface antigen |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00328189 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAC AAAAAGTAAT GGCAACTTTG TTGTTATCCA CTTTAGTCTT ATCGCTATCA
TCACCTTTAG TGACCTTAGC AGAAACTATT AATCCAGAAA CAAGCCTGAC AATGGCAACA
GCATCAACAG AAAGTTCTTC TGAAGCAGAG AAACAGGAAA AAACACAACC TACAGATTCA
GAAACTGCTT CACCTTCAGC CGAAGGAAGT ATCTCAACAG AAAAAACAGA GATTGGTACG
ACAGAGACAT CATCAAGCAA TGAATCATCA TCAAGTTCAT CACATCAATC TTCTTCCAAC
GAAGATGCTA AAACATCTGA TTCTGCTTCA ACAGCATCTA CTCCTAGCAC TAATACTACA
AACAGTAGTC AAGCAGACAG TAAGCCAGGT CAATCAACAA AGACTGAATT AAAACCTGAG
CCTACCTTAC CATTAGTAGA GCCTAAAATA ACTCCCGCTC CGTCTCAGAT AGAAAGTGTT
CAGACAAATC AGAATGCTTC TGTTCCTGCT TTATCCTTTG ATGATAACTT ATTATCAACA
CCGATTTCAC CAGTGACAGC AACGCCATTC TACGTAGAAC ACTGGTCTGG TCAGGATGCC
TACTCTCACT ATTTATTGTC ACATCGTTAC GGTATCAAAG CTGAACAATT AGATGGGTAC
TTAAAATCTT TAGGGATTCA ATATGATTCT AATCGTATCA ATGGTGCTAA GTTATTACAA
TGGGAAAAAG ATAGTGGTTT AGATGTCCGT GCTATTGTAG CTATTGCTGT CCTTGAAAGT
TCATTGGGAA CTCAAGGAGT GGCTAAGATG CCAGGTGCTA ATATGTTTGG TTATGGTGCC
TTTGATCATG ACTCTAGCCA TGCTAGTGCT TATAATGATG AAGAAGCAAT TATGTTGTTG
ACAAAAAATA CAATTATTAA AAACAACAAC TCTAGCTTTG AAATCCAAGA TTTGAAAGCA
CAGAAATTAT CTTCTGGACA ACTTAATACA GTTACTGAGG GTGGTGTTTA TTATACAGAT
AACTCTGGAA CTGGTAAACG TCGTGCCCAG ATTATGGAAG ATTTAGACCG CTGGATTGAT
CAACATGGAG GGACACCAGA AATTCCTGCT GCCTTGAAAG CTTTATCGAC AGCAAGTTTA
GCAGATTTAC CAAGTGGTTT TAGCTTATCA ACAGCAGTTA ACACAGCTAG CTATATTGCA
TCAACTTATC CATGGGGTGA ATGTACATGG TATGTCTTTA ACCGCGCTAA AGAGTTAGGT
TATACATTTG ATCCATTTAT GGGTAATGGT GGAGATTGGC AACATAAGGC TGGTTTTGAA
ACAACACATT CACCAAAAGT AGGCTATGCT GTATCATTTT CACCAGGACA AGCTGGTGCT
GATGGCACTT ACGGTCACGT AGCTATTGTT GAAGAAGTTA AAAAAGATGG TTCAGTTCTT
ATTTCAGAAT CTAATGCAAT GGGACGTGGT ATTGTCTCTT ACCGTACTTT TAGTTCAGCA
CAAGCTGCAC AATTAACTTA TGTTATTGGC CATAAATAA
|
|---|
| Protein sequence | MSKQKVMATL LLSTLVLSLS SPLVTLAETI NPETSLTMAT ASTESSSEAE KQEKTQPTDS
ETASPSAEGS ISTEKTEIGT TETSSSNESS SSSSHQSSSN EDAKTSDSAS TASTPSTNTT
NSSQADSKPG QSTKTELKPE PTLPLVEPKI TPAPSQIESV QTNQNASVPA LSFDDNLLST
PISPVTATPF YVEHWSGQDA YSHYLLSHRY GIKAEQLDGY LKSLGIQYDS NRINGAKLLQ
WEKDSGLDVR AIVAIAVLES SLGTQGVAKM PGANMFGYGA FDHDSSHASA YNDEEAIMLL
TKNTIIKNNN SSFEIQDLKA QKLSSGQLNT VTEGGVYYTD NSGTGKRRAQ IMEDLDRWID
QHGGTPEIPA ALKALSTASL ADLPSGFSLS TAVNTASYIA STYPWGECTW YVFNRAKELG
YTFDPFMGNG GDWQHKAGFE TTHSPKVGYA VSFSPGQAGA DGTYGHVAIV EEVKKDGSVL
ISESNAMGRG IVSYRTFSSA QAAQLTYVIG HK
|
|---|
| |