Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SAG1680 |
Symbol | aroE |
ID | 1014489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus agalactiae 2603V/R |
Kingdom | Bacteria |
Replicon accession | NC_004116 |
Strand | - |
Start bp | 1676132 |
End bp | 1677010 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637316849 |
Product | shikimate 5-dehydrogenase |
Protein accession | NP_688671 |
Protein GI | 22537820 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00934148 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCAT TAAATGGGGA AACTTTACTA ACTGGTCTAA TTGCCAATCC TGCACGCCAC TCTCTATCCC CGTTAATGTG GAATACCTCT TTTCAAGAAA AAAACATGAA TTATGCCTAT CTGACATTTG AAGTAGAAGA GGGTAAATTA ACAGAAGCTG TTCGAGGTGT CAGGGCATTG GGTATTCGTG GTGTTAATGT TTCAATGCCA TTTAAACAGA GTGTTATCCC TTTGCTAGAT GATTTATCTC CTCAAGCTAA ATTAGTGGGT GCTGTAAATA CTATCGTTAA TCAAGGTGGA ACCGGACGTT TAGTAGGCCA TATGACAGAT GGCATTGGTT GTTTTAAAGC TTTAGCAGCT CAAGGTTTCA GTGCTAAAAA TAAAATAATT ACAATAGCTG GTATTGGTGG TTCAGGTAAA GCAGTTGCAG TTCAAGCAGC TATGGAGGGA GTTGCGGAAA TTAGATTATT TAATCGTAAC AGCTCAAATT ACGATAAGGT CATTGACTTA TCAGATAAAA TTAAAAAACA GTTTCAAATA AAGGTAGTCG TTGATTATCT AGAAAATAAG ACAGCATTTA AAGACGCTAT TAGAACTAGT CATTTTTATA TTGATGCTAC TAGTTTAGGA ATGAGGCCAT TAGATAATTA TAGTTTAATT AACGATCCAG AAATTTTAAC ACCGAATTTA GTAGTTGTCG ACTTGGTTTA CAAGCCTAAA GAAACAGCAT TGTTACGATT TGTTAGACAA AATGGAGTGA AACATGCTTA TAATGGTCTA GGGATGCTGA TTTATCAAGG AGCAGAAGCA TTTCAATTAA TAACGAATCA AGAAATGCCT ATTAGCAGTG TTGAGAGAGT ATTACAAACT GAAAATTAA
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Protein sequence | MNSLNGETLL TGLIANPARH SLSPLMWNTS FQEKNMNYAY LTFEVEEGKL TEAVRGVRAL GIRGVNVSMP FKQSVIPLLD DLSPQAKLVG AVNTIVNQGG TGRLVGHMTD GIGCFKALAA QGFSAKNKII TIAGIGGSGK AVAVQAAMEG VAEIRLFNRN SSNYDKVIDL SDKIKKQFQI KVVVDYLENK TAFKDAIRTS HFYIDATSLG MRPLDNYSLI NDPEILTPNL VVVDLVYKPK ETALLRFVRQ NGVKHAYNGL GMLIYQGAEA FQLITNQEMP ISSVERVLQT EN
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