Gene SAG1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG1578 
SymbollivF 
ID1014387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp1583946 
End bp1584656 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content37% 
IMG OID637316747 
Productbranched-chain amino acid ABC transporter, ATP-binding protein 
Protein accessionNP_688569 
Protein GI22537718 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATGT TGAAAGTAGA AAATCTATCT ATTCACTATG GTGTTATTCA AGCGGTGAAT 
GATGTCTCGT TTGAAGTTAA CCAAGGTGAG GTTGTAACCT TAATTGGAGC CAATGGTGCA
GGAAAGACAT CAATTTTGAG GACAATTTCT GGTTTAGTAA GACCAAGTCA GGGTTCTATT
TCTTTTATGG GGAAACCTAT ACATAAGTTA GCAGCTAGAA AAATTGTTGG CAATGGTTTA
GCTCAGGTTC CAGAAGGGCG CCACGTTTTC TCAAGTTTGT CTGTTATGGA AAATTTAGAA
ATGGGAGCCT TTCTTCAAAA GGATCGTGAA CAAAATCAAA AAATGTTAAA AAAAGTGTTT
GATCGTTTTC CTCGCTTAGA AGAACGTAAA AACCAAGATG CAGCAACCTT ATCAGGTGGT
GAGCAGCAAA TGCTCGCTAT GGGGCGTGCA TTGATGAGTC GTCCTAAATT ATTACTTTTA
GATGAACCGT CAATGGGCCT AGCTCCAATT TTTATTCAAG AAATTTTTAA TATCATTGAA
GACATCAAAA AACAAGGGAC TACAGTTCTT TTAGTTGAAC AAAATGCAAA TAAAGCTCTG
ACGATTGCTG ATAAAGCATA TGTTCTAGAG ACTGGGAAGG TTGTTTTATC AGGGACAGGT
AAGGAATTAC TAGTTTCAGA TCAAGTTCGT AAAGCTTACT TAGGTGGATA A
 
Protein sequence
MTMLKVENLS IHYGVIQAVN DVSFEVNQGE VVTLIGANGA GKTSILRTIS GLVRPSQGSI 
SFMGKPIHKL AARKIVGNGL AQVPEGRHVF SSLSVMENLE MGAFLQKDRE QNQKMLKKVF
DRFPRLEERK NQDAATLSGG EQQMLAMGRA LMSRPKLLLL DEPSMGLAPI FIQEIFNIIE
DIKKQGTTVL LVEQNANKAL TIADKAYVLE TGKVVLSGTG KELLVSDQVR KAYLGG