| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG1475 |
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| Symbol | rsuA |
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| ID | 1014284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus agalactiae 2603V/R |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004116 |
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| Strand | - |
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| Start bp | 1495901 |
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| End bp | 1496623 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 637316647 |
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| Product | ribosomal small subunit pseudouridine synthase A |
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| Protein accession | NP_688469 |
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| Protein GI | 22537618 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00514925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGACTTG ATAAATTTTT AGTAGAATGC GGACTTGGTT CACGTACTCA AGTCAAATTA
ATATTGAAAA AAAAGCAGAT TAGTGTTAAT GGTAATAGCG AGACATCTCC AAAAGTACAG
GTAGATGAAT ATAGAGATGA GATTAAATAT AATGGAACTC TAGTGTCATA TGAAAAGTTT
GTTTATTATA TGCTTCATAA ACCCAAAGGT GTTATATCAG CAACGGATGA TCCTTCGCAT
AAAACCGTGT TAGATTTGCT AGACAAAACT GCTCGAGATA AAGCTGTTTT CCCAGTGGGG
CGTTTAGATA TTGATACAAC AGGCCTTTTG TTATTAACTA ATAATGGGGA ATTAGCGCAT
AAAATGTTAT CACCTAAAAA ACACGTTGAT AAATGCTATG AGGTAAAAAT CTCAGGGATA
ATGACAGAAG ACGATATTTT GGCATTTGAT AAAGGGATTA TTCTGAAAGA TTTTACTTGT
TTACCAGCAT TATTAGAAAT TGTGGAAGTA AATCAGGTGA AGAAGCAGAG TCTTGTTAAA
ATCACCATTA AGGAAGGAAA ATTCCATCAA GTTAAACGTA TGGTTGCTGC GTGTGGTAAG
GAAGTCTTAG AGCTAAAGCG TCTAAGGATG GGAAATCTAC AATTAGATAA ACAGCTAGAA
AGTGGACAAT GGAGACGGCT AACAATAAAA GAAATAGAAA AATTAGAAAA ATATATGCAA
TAA
|
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| Protein sequence | MRLDKFLVEC GLGSRTQVKL ILKKKQISVN GNSETSPKVQ VDEYRDEIKY NGTLVSYEKF
VYYMLHKPKG VISATDDPSH KTVLDLLDKT ARDKAVFPVG RLDIDTTGLL LLTNNGELAH
KMLSPKKHVD KCYEVKISGI MTEDDILAFD KGIILKDFTC LPALLEIVEV NQVKKQSLVK
ITIKEGKFHQ VKRMVAACGK EVLELKRLRM GNLQLDKQLE SGQWRRLTIK EIEKLEKYMQ
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