Gene SAG1379 details

Gene Information

• Locus tag: SAG1379
• Symbol: aroD
• ID: 1014188
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus agalactiae 2603V/R
• Kingdom: Bacteria
• Replicon accession: NC_004116
• Strand: -
• Start bp: 1388524
• End bp: 1389201
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637316555
• Product: 3-dehydroquinate dehydratase
• Protein accession: NP_688377
• Protein GI: 22537526
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0710] 3-dehydroquinate dehydratase
• TIGRFAM ID: [TIGR01093] 3-dehydroquinate dehydratase, type I

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0591105
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATAG TAGTACCAGT AATGCCTCGC AGTCTTGAAG AGGCTCAAGA AATAGATTTA 
TCAAAATTTG ATAGTGTTGA TATTATTGAA TGGCGAGCTG ATGCCTTACC AAAGGATGAC 
ATTATTAATG TAGCTCCAGC TATTTTTGAG AAATTCGCAG GTCATGAAAT TATTTTTACT 
CTTCGTACAA CGCGTGAAGG TGGTAATATT GTCTTATCTG ATGCTGAGTA TGTTGAGTTA 
ATCCAGAAAA TTAATTCTAT CTACAATCCA GATTATATTG ATTTTGAGTA TTTTTCACAT 
AAAGAAGTTT TTCAAGAAAT GCTAGAATTT CCAAATTTAG TCCTGTCTTA TCACAATTTT 
CAAGAGACAC CGGAGAATAT TATGGAGATA TTTTCAGAAT TAACAGCCCT AGCACCACGA 
GTTGTGAAAA TCGCAGTAAT GCCAAAGAAT GAACAAGATG TCTTAGACGT TATGAATTAC 
ACTCGCGGTT TCAAGACTAT TAATCCTGAT CAAGTTTATG CGACGGTATC TATGAGTAAA 
ATTGGACGTA TTTCTCGTTT TGCTGGTGAT GTAACTGGAT CTAGTTGGAC ATTTGCATAT 
TTAGATTCAT CTATCGCACC CGGACAAATT ACTATTTCAG AGATGAAGCG TGTCAAAGCA 
TTGCTTGACG CTGACTGA 

 

Protein sequence

MKIVVPVMPR SLEEAQEIDL SKFDSVDIIE WRADALPKDD IINVAPAIFE KFAGHEIIFT 
LRTTREGGNI VLSDAEYVEL IQKINSIYNP DYIDFEYFSH KEVFQEMLEF PNLVLSYHNF 
QETPENIMEI FSELTALAPR VVKIAVMPKN EQDVLDVMNY TRGFKTINPD QVYATVSMSK 
IGRISRFAGD VTGSSWTFAY LDSSIAPGQI TISEMKRVKA LLDAD