Gene SAG1312 details

Gene Information

• Locus tag: SAG1312
• Symbol: clpX
• ID: 1014119
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus agalactiae 2603V/R
• Kingdom: Bacteria
• Replicon accession: NC_004116
• Strand: -
• Start bp: 1320035
• End bp: 1321261
• Gene Length: 1227 bp
• Protein Length: 408 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637316486
• Product: ATP-dependent protease ATP-binding subunit ClpX
• Protein accession: NP_688310
• Protein GI: 22537459
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1219] ATP-dependent protease Clp, ATPase subunit
• TIGRFAM ID: [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX)

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGGGA ATCGTAATAA CGATATGAAT GTCTATTGTT CATTTTGTGG CAAAAGCCAA 
GATGAAGTAA AAAAAATTAT TGCAGGTAAT GGTGTTTTCA TTTGTAATGA ATGTGTGGCC 
TTATCACAAG AAATTATTAA GGAAGAATTA GCTGAGGAAG TACTGGCTGA TTTAGCAGAA 
GTACCAAAAC CTAAGGAACT ATTAGAAATA TTAAATCAAT ATGTTGTAGG GCAAGATCGT 
GCTAAACGTG CTTTAGCAGT TGCTGTCTAC AATCATTACA AGCGTGTTAG TTATACCGAG 
AGTAGTGACG ATGATGTAGA TTTGCAAAAA TCCAACATTT TGATGATTGG TCCAACTGGC 
TCAGGAAAAA CCTTCTTAGC ACAAACACTG GCTAAAAGCC TTAATGTACC GTTTGCTATT 
GCAGATGCGA CTTCATTGAC CGAAGCAGGA TACGTTGGAG AAGATGTTGA GAATATTCTT 
CTTAAATTGA TTCAAGCTGC TGATTATAAT GTCGAACGTG CTGAGCGTGG TATTATCTAC 
GTTGATGAAA TAGATAAAAT TGCTAAGAAA GGCGAAAATG TTTCTATCAC ACGTGATGTG 
TCTGGTGAAG GTGTACAGCA AGCCCTTCTT AAAATTATTG AGGGTACGGT AGCAAGTGTT 
CCCCCACAGG GTGGGCGTAA ACATCCTAAC CAAGAAATGA TTCAAATTAA TACCAAGAAC 
ATCCTTTTTA TTGTCGGTGG TGCTTTTGAT GGTATTGAAG ACCTTGTGAA GCAACGTTTA 
GGCGAAAAAG TTATTGGTTT TGGACAGACA AGCCGTAAAA TTGATGACAA CGCTTCTTAT 
ATGCAAGAGA TAATTTCTGA GGATATTCAA AAGTTTGGAC TGATTCCAGA GTTTATTGGC 
CGTTTACCAG TAGTTGCAGC GTTAGAACTT CTTACTGCAG AAGATCTGGT TCGTATTCTG 
ACAGAACCAC GCAATGCTTT GGTTAAACAA TACCAAACCT TATTATCTTA TGATGGTGTA 
GAATTGGAAT TTGACCAGGA TGCTCTATTG GCTATCGCTG ATAAGGCTAT CGAGCGCAAG 
ACTGGTGCAC GTGGTTTACG TTCTATTATT GAAGAAACGA TGCTTGATAT CATGTTTGAA 
ATTCCAAGCC AAGAAGATGT AACAAAAGTT CGTATCACAA AGGCTGCTGT TGAGGGTACT 
GACAAGCCTG TTTTAGAGAC GGCTTAG 

 

Protein sequence

MAGNRNNDMN VYCSFCGKSQ DEVKKIIAGN GVFICNECVA LSQEIIKEEL AEEVLADLAE 
VPKPKELLEI LNQYVVGQDR AKRALAVAVY NHYKRVSYTE SSDDDVDLQK SNILMIGPTG 
SGKTFLAQTL AKSLNVPFAI ADATSLTEAG YVGEDVENIL LKLIQAADYN VERAERGIIY 
VDEIDKIAKK GENVSITRDV SGEGVQQALL KIIEGTVASV PPQGGRKHPN QEMIQINTKN 
ILFIVGGAFD GIEDLVKQRL GEKVIGFGQT SRKIDDNASY MQEIISEDIQ KFGLIPEFIG 
RLPVVAALEL LTAEDLVRIL TEPRNALVKQ YQTLLSYDGV ELEFDQDALL AIADKAIERK 
TGARGLRSII EETMLDIMFE IPSQEDVTKV RITKAAVEGT DKPVLETA