| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG1216 |
|---|
| Symbol | |
|---|
| ID | 1014023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus agalactiae 2603V/R |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004116 |
|---|
| Strand | - |
|---|
| Start bp | 1222542 |
|---|
| End bp | 1226300 |
|---|
| Gene Length | 3759 bp |
|---|
| Protein Length | 1252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637316401 |
|---|
| Product | pullulanase, putative |
|---|
| Protein accession | NP_688225 |
|---|
| Protein GI | 22537374 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
|---|
| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain
[TIGR01168] Gram-positive signal peptide, YSIRK family
[TIGR02102] pullulanase, extracellular, Gram-positive |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0305928 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA AAGACTTATT TGGTGATAAA CAAACTCAAT ACACGATTAG AAAGTTAAGT
GTTGGAGTAG CTTCAGTTGC AACAGGGGTA TGTATTTTTC TTCATAGTCC ACAGGTATTT
GCTGAAGAAG TAAGTGCTTC TCCTGCAAAT ACAGCGATTG CAGAGTCGAA TATTAATCAG
GTTGACAACC AACAATCTAC TAATTTAAAA GATGACATAA ACTCAAACTC TGAGACGGTT
GTGACACCCT CAGATATGCC GGATACCAAG CAATTAGTAT CAGATGAAAC TGACACTCAA
AAGGGAGTGA CAGAGCCGGA TAAGGCGACA AGCCTGCTTG AAGAAAATAA AGGTCCTGTT
TCAGATAAAA ATACCTTAGA TTTAAAAGTA GCACCATCTA CATTGCAAAA TACTCCCGAC
AAAACTTCTC AAGCTATAGG TGCTCCAAGC CCTACCTTGA AAGTAGCTAA TCAAGCTCCA
CGGATTGAAA ATGGTTACTT TAGGCTACAT CTTAAAGAAT TGCCTCAAGG TCATCCTGTA
GAAAGCACTG GACTTTGGAT ATGGGGAGAT GTTGATCAAC CGTCTAGTAA TTGGCCAAAT
GGTGCTATCC CTATGACTGA TGCTAAGAAA GATGATTACG GTTATTATGT TGATTTTAAA
TTATCTGAAA AACAACGAAA ACAAATATCT TTTTTAATTA ATAACAAAGC AGGGACAAAT
TTAAGCGGCG ATCATCATAT TCCATTATTA CGACCTGAGA TGAACCAAGT TTGGATTGAT
GAAAAGTACG GTACACATAC TTATCAACCC CTCAAAGAAG GGTATGTCCG TATTAACTAT
TTGAGTTCCT CTAGTAACTA TGACCACTTA TCAGCATGGC TCTTTAAAGA TGTTGCAACC
CCCTCAACAA CTTGGCCAGA TGGTAGTAAT TTTGTGAATC AAGGACTATA TGGAAGGTAT
ATTGATGTAT CACTAAAAAC TAACGCCAAA GAGATTGGTT TTCTAATCTT AGATGAAAGT
AAGACAGGAG ATGCAGTGAA AGTTCAACCC AACGACTATG TTTTTAGAGA TTTAGCTAAC
CATAACCAAA TTTTTGTAAA AGATAAGGAT CCAAAGGTTT ATAATAATCC TTATTACATT
GATCAAGTGC AGCTAAAGGA TGCCCAACAA ATTGATTTAA CAAGTATTCA AGCAAGTTTT
ACAACTCTAG ATGGGGTAGA TAAAACTGAA ATTTTAAAAG AATTGAAAGT GACTGATAAA
AATCAAAATG CTATACAAAT TTCTGATATC ACTCTCGATA CTAGTAAATC TCTTTTAATA
ATCAAAGGCG ACTTTAATCC TAAACAAGGT CATTTCAACA TATCTTATAA TGGTAACAAT
GTCATGACAA GGCAATCTTG GGAATTTAAA GACCAACTTT ATGCTTATAG TGGAAATTTA
GGTGCAGTTC TCAATCAAGA TGGTTCAAAA GTTGAAGCCA GCCTCTGGTC ACCGAGTGCT
GATAGTGTCA CTATGATTAT TTATGACAAA GATAACCAAA ACAGGGTTGT AGCGACTACC
CCCCTTATGA AAAATAATAA AGGTGTTTGG CAGACGATAC TTGATACTAA ATTAGGTATT
AAAAACTATA CTGGTTACTA TTATCTTTAC GAAATAAAAA GAGGTAAGGA TAAGGTTAAG
ATTTTAGATC CTTATGCAAA GTCATTAGCA GAGTGGGATA GTAATACTGT TAATGATGAT
ATTAAAACGG CTAAAGCAGC TTTTGTAAAT CCAAGTCAAC TTGGACCTCA AAATTTAAGT
TTTGCTAAAA TTGCTAATTT TAAAGGAAGA CAAGATGCTG TTATATACGA AGCACATGTA
AGAGACTTCA CTTCTGATCG ATCTTTGGAT GGAAAATTAA AAAATCAATT TGGTACCTTT
GCAGCCTTTT CAGAGAAACT AGATTATTTA CAGAAATTAG GAGTTACACA CATTCAGCTT
TTACCGGTAT TGAGTTATTT TTATGTTAAT GAAATGGATA AGTCACGCTC AACAGCTTAC
ACTTCCTCAG ACAATAATTA CAATTGGGGC TATGACCCAC AGAGCTATTT TGCTCTTTCT
GGGATGTATT CAGAGAAACC AAAAGATCCA TCAGCACGTA TCGCCGAATT AAAACAATTA
ATACATGATA TTCATAAACG TGGCATGGGG GTTATACTTG ATGTCGTCTA TAATCACACT
GCAAAAACTT ATCTCTTTGA GGATATAGAA CCTAATTATT ATCACTTTAT GAATGAAGAT
GGTTCACCAA GAGAAAGTTT TGGAGGGGGA CGTTTAGGAA CCACTCATGC AATGAGTCGT
CGTGTTTTGG TTGATTCCAT TAAATATCTT ACAAGTGAAT TTAAAGTTGA TGGTTTCCGT
TTTGATATGA TGGGAGATCA TGATGCGGCT GCGATTGAAT TAGCTTATAA AGAAGCTAAA
GCTATTAATC CTAATATGAT TATGATTGGT GAGGGCTGGA GAACATTCCA AGGCGATCAA
GGTCAGCCGG TTAAACCAGC TGACCAAGAT TGGATGAAGT CAACCGATAC AGTTGGCGTC
TTTTCAGATG ATATTCGTAA TAGCTTGAAA TCTGGTTTTC CAAATGAAGG TACTCCAGCT
TTCATCACAG GTGGCCCACA ATCTTTACAA GGTATTTTTA AAAATATCAA AGCACAACCT
GGGAATTTTG AAGCAGATTC GCCAGGAGAT GTGGTGCAGT ATATTGCTGC ACATGATAAC
CTTACCTTGC ATGATGTGAT TGCAAAATCA ATTAATAAAG ACCCTAAGGT AGCTGAAGAA
GAGATTCATA GACGTCTGCG TTTAGGAAAT GTAATGATTT TAACATCTCA AGGGACAGCA
TTCATTCATT CTGGTCAAGA GTATGGTCGT ACGAAGCGTT TACTTAACCC TGATTACATG
ACAAAAGTTT CAGATGACAA ATTGCCTAAT AAAGCAACAC TTATTGAAGC TGTTAAAGAA
TACCCATATT TTATTCATGA TTCATATGAT TCTTCAGATG CCATTAATCA TTTTGATTGG
GCAGCAGCCA CAGATAATAA CAAACACCCA ATTTCAACGA AAACACAGGC CTATACAGCA
GGTTTAATCA CATTAAGGCG TTCAACAGAT GCTTTCCGAA AATTGAGCAA AGCAGAAATT
GATCGTGAGG TTAGCTTGAT TACAGAGGTA GGTCAAGGTG ATATTAAAGA AAAAGATTTG
GTTATTGCTT ACCAAACAAT AGATTCTAAA GGTGATATTT ACGCAGTATT TGTTAATGCT
GATAGTAAAG CTAGAAACGT TTTACTAGGT GAAAAATATA AACACCTTTT AAAAGGGCAA
GTAATTGTTG ATGCTGATCA AGCGGGGATT AAACCAATCT CAACTCCTAG AGGTGTTCAT
TTTGAAAAAG ATAGTTTGCT GATTGATCCA TTAACAGCAA TTGTGATTAA AGTTGGCAAA
GTTGCTCCTA GCCCTAAGGA GGAATTGCAA GCAGATTATC CCAAAACACA ATCTTTCAAG
GAATCTAAAA CGGTAGAAAA AGTAAATAGA ATAGCTAATA AGACCTCAAT AACTCCTGTA
GTTTCTAAGA AGGCCGATTC ATATCTGACA AATGAAGCTA ATTTGCCAAA AACTGGAGAT
AAGTCATCAA AAATACTAAG TGTAGTAGGA ATAAGCATTC TAGCAAGTCT ACTTGCTCTA
GTAGGTCTCT CTTTAAAGAG GAATCGTCAC TTAAAATAA
|
|---|
| Protein sequence | MKRKDLFGDK QTQYTIRKLS VGVASVATGV CIFLHSPQVF AEEVSASPAN TAIAESNINQ
VDNQQSTNLK DDINSNSETV VTPSDMPDTK QLVSDETDTQ KGVTEPDKAT SLLEENKGPV
SDKNTLDLKV APSTLQNTPD KTSQAIGAPS PTLKVANQAP RIENGYFRLH LKELPQGHPV
ESTGLWIWGD VDQPSSNWPN GAIPMTDAKK DDYGYYVDFK LSEKQRKQIS FLINNKAGTN
LSGDHHIPLL RPEMNQVWID EKYGTHTYQP LKEGYVRINY LSSSSNYDHL SAWLFKDVAT
PSTTWPDGSN FVNQGLYGRY IDVSLKTNAK EIGFLILDES KTGDAVKVQP NDYVFRDLAN
HNQIFVKDKD PKVYNNPYYI DQVQLKDAQQ IDLTSIQASF TTLDGVDKTE ILKELKVTDK
NQNAIQISDI TLDTSKSLLI IKGDFNPKQG HFNISYNGNN VMTRQSWEFK DQLYAYSGNL
GAVLNQDGSK VEASLWSPSA DSVTMIIYDK DNQNRVVATT PLMKNNKGVW QTILDTKLGI
KNYTGYYYLY EIKRGKDKVK ILDPYAKSLA EWDSNTVNDD IKTAKAAFVN PSQLGPQNLS
FAKIANFKGR QDAVIYEAHV RDFTSDRSLD GKLKNQFGTF AAFSEKLDYL QKLGVTHIQL
LPVLSYFYVN EMDKSRSTAY TSSDNNYNWG YDPQSYFALS GMYSEKPKDP SARIAELKQL
IHDIHKRGMG VILDVVYNHT AKTYLFEDIE PNYYHFMNED GSPRESFGGG RLGTTHAMSR
RVLVDSIKYL TSEFKVDGFR FDMMGDHDAA AIELAYKEAK AINPNMIMIG EGWRTFQGDQ
GQPVKPADQD WMKSTDTVGV FSDDIRNSLK SGFPNEGTPA FITGGPQSLQ GIFKNIKAQP
GNFEADSPGD VVQYIAAHDN LTLHDVIAKS INKDPKVAEE EIHRRLRLGN VMILTSQGTA
FIHSGQEYGR TKRLLNPDYM TKVSDDKLPN KATLIEAVKE YPYFIHDSYD SSDAINHFDW
AAATDNNKHP ISTKTQAYTA GLITLRRSTD AFRKLSKAEI DREVSLITEV GQGDIKEKDL
VIAYQTIDSK GDIYAVFVNA DSKARNVLLG EKYKHLLKGQ VIVDADQAGI KPISTPRGVH
FEKDSLLIDP LTAIVIKVGK VAPSPKEELQ ADYPKTQSFK ESKTVEKVNR IANKTSITPV
VSKKADSYLT NEANLPKTGD KSSKILSVVG ISILASLLAL VGLSLKRNRH LK
|
|---|
| |