Gene SAG1160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG1160 
SymbolneuC 
ID1013967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand- 
Start bp1164395 
End bp1165549 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content36% 
IMG OID637316345 
ProductUDP-N-acetylglucosamine-2-epimerase NeuC 
Protein accessionNP_688169 
Protein GI22537318 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase
[TIGR03568] UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TTTGTTTAGT AACCGGATCG CGTGCTGAAT ACGGAATAAT GAAGCCATTG 
ATTCAAAGAT TGTCAAAAGA TAAAGAAGTC AACTTACAAA TTATTGCAAC AGCAATGCAT 
CTGGAAGAAA AGTACGGCTA TACTTATCGT CAAATTGAAG AAGACGGTTT TGATATTGCT 
TATAAAGTTC CCTTACATCT TTATGATACT GACAGAAGAA CTGTATCTAC TGCAATGGCG 
CATTTACAAC TAGGATTGAC CAAAATTTTT GACAAGGAAG ACTATGATCT AGTCATCATT 
TTAGGGGATC GTTATGAAAT GTTACCAGTT GTGAATGTAG CGTTGATTTA TAATGTCCCA 
GTATGCCACC TTCATGGAGG GGAGACCTCA TTAGGCAATT TTGATGAGTA TATTCGCCAT 
GCAATTACTA AGATGAGTCA CCTACACTTA GTCTCTACAG AGGACTTTCG TCAACGTGTG 
ATTCAGATGG GAGAACAACC TCAATTTGTA ATTAACACAG GAGCTCTCGG AGTGGAAAAT 
GCTCTATCAA TCCCTTCTCT AACCAAAGAA GCAATAGAAA AGCAATTAGG TATTGCACTA 
GAGGAATCCT ATTTTGTTGT TCTCTATCAT CCTGTTACTT TTGAACAAGG AAAAAGTGCT 
GGAGAGCAGA TGAAAGCGGT ACTATCAGCC CTTTCTAAGT TTGGTGTCCA GTGTCTATTT 
ATAGGATCCA ATTCAGATAC TGGTTCTGAT GATATTGCAA AGGCTATCAA TACTTATTTG 
ACAAATCATG AAAATAGTCA TTGCTTTGCT TCTTTATCAA CCCAACTTTA TCATTCCTTA 
ATTCGTCATT CACTAGGACT GATTGGTAAT TCGTCTTCTG GTTTAATAGA AGTTCCTTCT 
TTGATGAAAC CTACTCTTAA TATTGGTGAT CGCCAAAAAG GTAGGCTACA TGGAGAAAGT 
GTAGTAAGTG TACCAGTCGA AACCTCCTCT GTATTGGAGG GATTATCAAA ATTGAATGAA 
GTGACCAACT TTGACAATCC CTACTACAAA GAGAATGCTT CATCTATTGC ATATGAAGCA 
ATAAAGCTGT ATTTGAAAGA TGAACCTTCA ATTTCCCAAC CATTTTATGA TTTAAAGGAG 
AATAATCTAA AATGA
 
Protein sequence
MKKICLVTGS RAEYGIMKPL IQRLSKDKEV NLQIIATAMH LEEKYGYTYR QIEEDGFDIA 
YKVPLHLYDT DRRTVSTAMA HLQLGLTKIF DKEDYDLVII LGDRYEMLPV VNVALIYNVP 
VCHLHGGETS LGNFDEYIRH AITKMSHLHL VSTEDFRQRV IQMGEQPQFV INTGALGVEN 
ALSIPSLTKE AIEKQLGIAL EESYFVVLYH PVTFEQGKSA GEQMKAVLSA LSKFGVQCLF 
IGSNSDTGSD DIAKAINTYL TNHENSHCFA SLSTQLYHSL IRHSLGLIGN SSSGLIEVPS 
LMKPTLNIGD RQKGRLHGES VVSVPVETSS VLEGLSKLNE VTNFDNPYYK ENASSIAYEA 
IKLYLKDEPS ISQPFYDLKE NNLK