Gene SAG1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG1016 
Symbol 
ID1013820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp1026073 
End bp1026807 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content36% 
IMG OID637316200 
Productresponse regulator 
Protein accessionNP_688027 
Protein GI22537176 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTT TAGTAGTTGA TGATGAACCA GTTGCACGTA ACGAATTAAT TTACCTTCTT 
AATAAGTATG ATTCTAACCT CGTTATAGCA GAGGCGCATG ATATGGCTAC TGCATTAGCT
ATTTTACTTA GAGAAACTTT TGATGTAGCA CTGTTAGATA TCCATCTCAG AGATGATTCT
GGGTTGCAAT TAGCAGAGTA TATCAATAAA ATGCCCAAAC CACCATTATT GATATTTGCG
ACTGCTTATG ATCAATATGC TATTCAGGCT TTTGAGCATG ATGCGCGTGA TTATTTGTTA
AAACCCTATG ATTTTGATAG GCTAAAGCAA GCTATGGATA GAGTAAAAGG AGCGCTAAGT
ACATCTACAA TTATAGAGAG CGTAACTTCC GGTCCTCTCT TCAAGCAACA GTATCCATTG
ACAGTAGAAG ATCGAATCTA TCTGGTGTCG GCGGATGATA TCCTTTTGAT TGAAGCTATG
CAAGGAAAAC TGATTATACA AACACCTGAT AAAAATTATG AAATTGATGG CTCTCTACAA
CAATGGCAAG ATAAACTACC ATCATCTCAA TTTGTACGGG TACATCGCTC TTACATTGTG
AACATTAATG CTATTAAAAC GATTGAACCT TGGTTTAACC AAACACTTCA GTTACACCTT
TGTAATAAAA TAACAGTTCC TGTTAGCAGA GCAAATGTAA AACCCCTAAA ACAAATGTTA
GGCATATCTA CCTAA
 
Protein sequence
MKVLVVDDEP VARNELIYLL NKYDSNLVIA EAHDMATALA ILLRETFDVA LLDIHLRDDS 
GLQLAEYINK MPKPPLLIFA TAYDQYAIQA FEHDARDYLL KPYDFDRLKQ AMDRVKGALS
TSTIIESVTS GPLFKQQYPL TVEDRIYLVS ADDILLIEAM QGKLIIQTPD KNYEIDGSLQ
QWQDKLPSSQ FVRVHRSYIV NINAIKTIEP WFNQTLQLHL CNKITVPVSR ANVKPLKQML
GIST