Gene SAG1012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG1012 
SymbolrnhB 
ID1013816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp1021785 
End bp1022546 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content34% 
IMG OID637316196 
Productribonuclease HII 
Protein accessionNP_688023 
Protein GI22537172 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0454013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAA TTAAAGAAAT CAAAGCAATT TTAGAGACTA TTGTTGATTT AAAAGACAAA 
CGTTGGCAAG AATATCAAAC AGATTCACGC GCAGGTGTTC AAAAAGCAAT CCTTCAACGA
AAAAAAAATA TTCAGTCAGA TTTAGACGAA GAAGCGCGCT TAGAACAAAT GTTGGTCTAC
GAAAAAAAAC TTTACATTGA ACATATAAAC CTTATTGCAG GAATCGATGA AGTAGGTAGA
GGTCCTTTAG CGGGACCAGT AGTAGCTGCT GCTGTTATTC TTCCACCAAA CTGTAAAATA
AAACATCTCA ATGACTCCAA AAAAATTCCA AAGAAAAAGC ATCAAGAAAT CTATCAAAAT
ATTTTAGATC AAGCGTTAGC AGTTGGTATT GGTATTCAAG ACAGCCAATG TATTGATGAT
ATCAACATTT ATGAAGCTAC AAAACATGCT ATGATTGATG CAGTTTCTCA TTTATCTGTG
GCTCCTGAAC ATCTTTTAAT TGATGCTATG GTTTTAGATC TATCAATTCC ACAAACTAAA
ATTATCAAAG GTGATGCTAA TTCACTCTCT ATTGCAGCAG CTTCAATCGT AGCTAAAGTG
ACCAGAGATA AAATAATGTC TGATTATGAT AGCACATATC CTGGATATGC ATTTTCTAAA
AATGCTGGCT ATGGTACTAA AGAGCATTTA GAAGGTTTGC AAAAATACGG TATTACTCCG
ATACATCGTA AAAGTTTTGA ACCTATAAAA TCAATGTTGT AA
 
Protein sequence
MATIKEIKAI LETIVDLKDK RWQEYQTDSR AGVQKAILQR KKNIQSDLDE EARLEQMLVY 
EKKLYIEHIN LIAGIDEVGR GPLAGPVVAA AVILPPNCKI KHLNDSKKIP KKKHQEIYQN
ILDQALAVGI GIQDSQCIDD INIYEATKHA MIDAVSHLSV APEHLLIDAM VLDLSIPQTK
IIKGDANSLS IAAASIVAKV TRDKIMSDYD STYPGYAFSK NAGYGTKEHL EGLQKYGITP
IHRKSFEPIK SML