Gene SAG0961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG0961 
SymbolsrtA 
ID1013765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp969109 
End bp969852 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content34% 
IMG OID637316146 
Productsortase SrtA 
Protein accessionNP_687973 
Protein GI22537122 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3764] Sortase (surface protein transpeptidase) 
TIGRFAM ID[TIGR01076] LPXTG-site transpeptidase (sortase) family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000962691 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAATA AAAAAAAATC ACATGGTTTC TTTAACTTTG TTAGATGGTT ATTGGTTGTA 
TTGCTAATTA TTGTTGGGTT GGCTTTGGTG TTCAATAAAC CAATTCGCAA TGCTTTCATA
GCTCATCAAT CAAATCATTA TCAAATTTCA CGAGTTAGTA AAAAAACAAT TGAAAAAAAT
AAGAAATCTA AAACAAGTTA TGACTTTTCA TCAGTCAAAT CTATTAGTAC AGAATCGATT
TTATCTGCTC AAACGAAATC ACATAATTTG CCTGTAATAG GAGGGATTGC TATACCAGAT
GTCGAAATCA ATCTCCCAAT TTTCAAAGGA CTGGGCAATA CAGAGTTGAG TTATGGTGCA
GGAACGATGA AAGAAAACCA GATTATGGGA GGCCCAAATA ACTATGCCTT AGCTAGTCAC
CATGTCTTTG GTTTGACAGG TTCTTCTAAG ATGCTCTTTT CACCTTTAGA ACATGCTAAG
AAAGGTATGA AAGTTTACCT CACTGATAAA AGCAAAGTAT ACACTTACAC TATTACTGAA
ATTTCAAAGG TAACACCAGA ACATGTTGAG GTTATTGATG ATACACCTGG CAAGAGCCAA
CTCACTTTAG TGACCTGTAC GGATCCAGAA GCCACAGAAC GTATTATTGT GCATGCTGAA
TTAGAAAAAA CAGGTGAATT TTCAACAGCA GATGAGTCGA TATTAAAAGC ATTTTCGAAA
AAATATAATC AAATTAATCT CTAG
 
Protein sequence
MRNKKKSHGF FNFVRWLLVV LLIIVGLALV FNKPIRNAFI AHQSNHYQIS RVSKKTIEKN 
KKSKTSYDFS SVKSISTESI LSAQTKSHNL PVIGGIAIPD VEINLPIFKG LGNTELSYGA
GTMKENQIMG GPNNYALASH HVFGLTGSSK MLFSPLEHAK KGMKVYLTDK SKVYTYTITE
ISKVTPEHVE VIDDTPGKSQ LTLVTCTDPE ATERIIVHAE LEKTGEFSTA DESILKAFSK
KYNQINL