Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SAG0961 |
Symbol | srtA |
ID | 1013765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus agalactiae 2603V/R |
Kingdom | Bacteria |
Replicon accession | NC_004116 |
Strand | + |
Start bp | 969109 |
End bp | 969852 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637316146 |
Product | sortase SrtA |
Protein accession | NP_687973 |
Protein GI | 22537122 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3764] Sortase (surface protein transpeptidase) |
TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000962691 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTAATA AAAAAAAATC ACATGGTTTC TTTAACTTTG TTAGATGGTT ATTGGTTGTA TTGCTAATTA TTGTTGGGTT GGCTTTGGTG TTCAATAAAC CAATTCGCAA TGCTTTCATA GCTCATCAAT CAAATCATTA TCAAATTTCA CGAGTTAGTA AAAAAACAAT TGAAAAAAAT AAGAAATCTA AAACAAGTTA TGACTTTTCA TCAGTCAAAT CTATTAGTAC AGAATCGATT TTATCTGCTC AAACGAAATC ACATAATTTG CCTGTAATAG GAGGGATTGC TATACCAGAT GTCGAAATCA ATCTCCCAAT TTTCAAAGGA CTGGGCAATA CAGAGTTGAG TTATGGTGCA GGAACGATGA AAGAAAACCA GATTATGGGA GGCCCAAATA ACTATGCCTT AGCTAGTCAC CATGTCTTTG GTTTGACAGG TTCTTCTAAG ATGCTCTTTT CACCTTTAGA ACATGCTAAG AAAGGTATGA AAGTTTACCT CACTGATAAA AGCAAAGTAT ACACTTACAC TATTACTGAA ATTTCAAAGG TAACACCAGA ACATGTTGAG GTTATTGATG ATACACCTGG CAAGAGCCAA CTCACTTTAG TGACCTGTAC GGATCCAGAA GCCACAGAAC GTATTATTGT GCATGCTGAA TTAGAAAAAA CAGGTGAATT TTCAACAGCA GATGAGTCGA TATTAAAAGC ATTTTCGAAA AAATATAATC AAATTAATCT CTAG
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Protein sequence | MRNKKKSHGF FNFVRWLLVV LLIIVGLALV FNKPIRNAFI AHQSNHYQIS RVSKKTIEKN KKSKTSYDFS SVKSISTESI LSAQTKSHNL PVIGGIAIPD VEINLPIFKG LGNTELSYGA GTMKENQIMG GPNNYALASH HVFGLTGSSK MLFSPLEHAK KGMKVYLTDK SKVYTYTITE ISKVTPEHVE VIDDTPGKSQ LTLVTCTDPE ATERIIVHAE LEKTGEFSTA DESILKAFSK KYNQINL
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