Gene SAG0876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG0876 
SymboltrmE 
ID1013680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp881804 
End bp883180 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content37% 
IMG OID637316063 
ProducttRNA modification GTPase TrmE 
Protein accessionNP_687890 
Protein GI22537039 
COG category[R] General function prediction only 
COG ID[COG0486] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000254143 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTATTA CAAAAGAATT TGATACCATC GCAGCTATTT CAACTCCTCT CGGTGAGGGA 
GCTATTGGTA TTGTCCGTAT ATCTGGTACA GATGCCTTAA AGATAGCATC AAAAATTTAT
CGTGGAAAAG ATCTATCCGC GATCCAATCC CATACCTTAA ACTATGGTCA TATTGTGGAC
CCAGATAAAA ATGAAATCTT GGATGAAGTT ATGTTAGGCG TTATGCTTGC TCCAAAAACA
TTCACAAGAG AAGATGTTAT TGAAATTAAT ACGCATGGAG GAATTGCAGT TACTAACGAA
ATTCTTCAGT TAATTTTACG ACATGGAGCA CGAATGGCTG AACCAGGAGA ATTTACTAAA
CGTGCTTTTT TAAATGGTCG AGTTGACTTG ACTCAGGCTG AAGCTGTTAT GGATCTTATT
AGAGCTAAAA CAGATAAAGC AATGGATATT GCCGTTAAGC AATTAGATGG TTCTTTAAAG
ACACTAATCA ATAACACTCG ACAAGAAATT TTAAATACTC TAGCCCAAGT TGAAGTTAAT
ATCGATTACC CTGAATATGA TGACGTTGAA GAGATGACTA CAACACTGAT GCGTGAAAAA
ACACAAGAGT TTCAAGCACT TATGGAAAAT TTACTTCGAA CTGCCAGACG TGGAAAAATT
CTTCGAGAAG GACTTTCAAC AGCAATCATT GGTCGTCCAA ATGTCGGTAA ATCCAGCTTA
CTAAATAACC TCTTACGTGA AGAAAAGGCG ATTGTGACAG ATATTGAAGG AACAACTCGT
GATGTTATTG AAGAATACGT CAATATTAAA GGAGTTCCTT TAAAACTAGT TGACACTGCT
GGTATCCGTG ATACAGATGA TATCGTTGAA AAAATTGGTG TTGAACGTTC AAAGAAGGCT
TTAGAAGAAG CCGACCTTGT GTTGTTGGTT CTCAATAGTT CCGAACCACT AACATTACAA
GACCGCTCCC TTCTAGAACT AAGTAAAGAA AGTAATCGTA TCGTATTACT CAATAAAACG
GATCTTCCTC AAAAAATAGA AGTTAACGAA TTACCTAAAA ATGTTATTCC AATTTCGGTT
TTAGAAAATG AAAACATCGA TAAAATCGAA GAACGTATTA ACGATATTTT CTTTGACAAC
GCTGGTATGG TAGAACATGA CGCTACTTAT CTATCAAATG CTCGCCATAT CTCACTAATT
GAAAAAGCCG TTGATAGTTT AAAAGCTGTC AATGAGGGCT TGGAATTAGG AATGCCTGTT
GATCTCTTAC AAGTCGATAT GACTAGAACT TGGGAAATAC TTGGAGAAAT CACTGGGGAT
GCAGCTCCAG ATGAACTAAT AACTCAGCTC TTCAGCCAAT TCTGCTTAGG TAAATAA
 
Protein sequence
MSITKEFDTI AAISTPLGEG AIGIVRISGT DALKIASKIY RGKDLSAIQS HTLNYGHIVD 
PDKNEILDEV MLGVMLAPKT FTREDVIEIN THGGIAVTNE ILQLILRHGA RMAEPGEFTK
RAFLNGRVDL TQAEAVMDLI RAKTDKAMDI AVKQLDGSLK TLINNTRQEI LNTLAQVEVN
IDYPEYDDVE EMTTTLMREK TQEFQALMEN LLRTARRGKI LREGLSTAII GRPNVGKSSL
LNNLLREEKA IVTDIEGTTR DVIEEYVNIK GVPLKLVDTA GIRDTDDIVE KIGVERSKKA
LEEADLVLLV LNSSEPLTLQ DRSLLELSKE SNRIVLLNKT DLPQKIEVNE LPKNVIPISV
LENENIDKIE ERINDIFFDN AGMVEHDATY LSNARHISLI EKAVDSLKAV NEGLELGMPV
DLLQVDMTRT WEILGEITGD AAPDELITQL FSQFCLGK