Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SAG0876 |
Symbol | trmE |
ID | 1013680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus agalactiae 2603V/R |
Kingdom | Bacteria |
Replicon accession | NC_004116 |
Strand | - |
Start bp | 881804 |
End bp | 883180 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637316063 |
Product | tRNA modification GTPase TrmE |
Protein accession | NP_687890 |
Protein GI | 22537039 |
COG category | [R] General function prediction only |
COG ID | [COG0486] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000254143 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTATTA CAAAAGAATT TGATACCATC GCAGCTATTT CAACTCCTCT CGGTGAGGGA GCTATTGGTA TTGTCCGTAT ATCTGGTACA GATGCCTTAA AGATAGCATC AAAAATTTAT CGTGGAAAAG ATCTATCCGC GATCCAATCC CATACCTTAA ACTATGGTCA TATTGTGGAC CCAGATAAAA ATGAAATCTT GGATGAAGTT ATGTTAGGCG TTATGCTTGC TCCAAAAACA TTCACAAGAG AAGATGTTAT TGAAATTAAT ACGCATGGAG GAATTGCAGT TACTAACGAA ATTCTTCAGT TAATTTTACG ACATGGAGCA CGAATGGCTG AACCAGGAGA ATTTACTAAA CGTGCTTTTT TAAATGGTCG AGTTGACTTG ACTCAGGCTG AAGCTGTTAT GGATCTTATT AGAGCTAAAA CAGATAAAGC AATGGATATT GCCGTTAAGC AATTAGATGG TTCTTTAAAG ACACTAATCA ATAACACTCG ACAAGAAATT TTAAATACTC TAGCCCAAGT TGAAGTTAAT ATCGATTACC CTGAATATGA TGACGTTGAA GAGATGACTA CAACACTGAT GCGTGAAAAA ACACAAGAGT TTCAAGCACT TATGGAAAAT TTACTTCGAA CTGCCAGACG TGGAAAAATT CTTCGAGAAG GACTTTCAAC AGCAATCATT GGTCGTCCAA ATGTCGGTAA ATCCAGCTTA CTAAATAACC TCTTACGTGA AGAAAAGGCG ATTGTGACAG ATATTGAAGG AACAACTCGT GATGTTATTG AAGAATACGT CAATATTAAA GGAGTTCCTT TAAAACTAGT TGACACTGCT GGTATCCGTG ATACAGATGA TATCGTTGAA AAAATTGGTG TTGAACGTTC AAAGAAGGCT TTAGAAGAAG CCGACCTTGT GTTGTTGGTT CTCAATAGTT CCGAACCACT AACATTACAA GACCGCTCCC TTCTAGAACT AAGTAAAGAA AGTAATCGTA TCGTATTACT CAATAAAACG GATCTTCCTC AAAAAATAGA AGTTAACGAA TTACCTAAAA ATGTTATTCC AATTTCGGTT TTAGAAAATG AAAACATCGA TAAAATCGAA GAACGTATTA ACGATATTTT CTTTGACAAC GCTGGTATGG TAGAACATGA CGCTACTTAT CTATCAAATG CTCGCCATAT CTCACTAATT GAAAAAGCCG TTGATAGTTT AAAAGCTGTC AATGAGGGCT TGGAATTAGG AATGCCTGTT GATCTCTTAC AAGTCGATAT GACTAGAACT TGGGAAATAC TTGGAGAAAT CACTGGGGAT GCAGCTCCAG ATGAACTAAT AACTCAGCTC TTCAGCCAAT TCTGCTTAGG TAAATAA
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Protein sequence | MSITKEFDTI AAISTPLGEG AIGIVRISGT DALKIASKIY RGKDLSAIQS HTLNYGHIVD PDKNEILDEV MLGVMLAPKT FTREDVIEIN THGGIAVTNE ILQLILRHGA RMAEPGEFTK RAFLNGRVDL TQAEAVMDLI RAKTDKAMDI AVKQLDGSLK TLINNTRQEI LNTLAQVEVN IDYPEYDDVE EMTTTLMREK TQEFQALMEN LLRTARRGKI LREGLSTAII GRPNVGKSSL LNNLLREEKA IVTDIEGTTR DVIEEYVNIK GVPLKLVDTA GIRDTDDIVE KIGVERSKKA LEEADLVLLV LNSSEPLTLQ DRSLLELSKE SNRIVLLNKT DLPQKIEVNE LPKNVIPISV LENENIDKIE ERINDIFFDN AGMVEHDATY LSNARHISLI EKAVDSLKAV NEGLELGMPV DLLQVDMTRT WEILGEITGD AAPDELITQL FSQFCLGK
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