Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SAG0874 |
Symbol | rexA |
ID | 1013678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus agalactiae 2603V/R |
Kingdom | Bacteria |
Replicon accession | NC_004116 |
Strand | + |
Start bp | 877218 |
End bp | 880841 |
Gene Length | 3624 bp |
Protein Length | 1207 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637316061 |
Product | exonuclease RexA |
Protein accession | NP_687888 |
Protein GI | 22537037 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
TIGRFAM ID | [TIGR02785] recombination helicase AddA, Firmicutes type |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.149314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTTTA AGCCTTTCTT AAATCCAGAA GATATTGCTG TTATTCAGAC AGAAGAAAAA AATTCTGATA AAAAACAAAA GCGAACGCCT GAACAAATTG AAGCCATTTA TACTTTTGGT AACAATGTCC TGGTATCAGC TTCGGCTGGT TCTGGAAAGA CTTTTGTAAT GGTTGAGCGG ATTTTAGATA AACTTTTAAG AGGGGTTCCG ATTGACTCTT TGTTTATCTC AACATTTACA GTAAAAGCGG CAGGTGAGCT CAAAGAACGT TTAGAAAAGA AAATAAACGA GTCTTTGAAA TCCGCAGAAT CAGATGATTT AAAACAGTTT CTCACCCAGC AACTTGTCGG CATTCAAACA GCTGATATTG GTACTATGGA TGCTTTTACG CAAAAAATAG TTAACCAATA TGGTTATACT TTGGGCATAT CACCTATATT TAGGATTTTA CAAGATAAAA ATGAGCAAGA CGTCATAAAG AATGAGGTCT ATGCTGATTT ATTTTCTGAC TACATGACTG GGAAGAATGC AGCTTCATTC ATAAAATTAG TCAAAAATTT CTCAGGTAAT CGTAAAGATA GCAAAGCTTT TCGAGAAATG GTTTATAAAG TTTATGCTTT TAGCCAGTCC ACCGATAACC CCAAGCGCTG GATGCAAACA GTTTTTCTAA AAGGTGCACA AACTTACACT GATTTTGAAG CTATTCCAGA TCAAGAAGTT TCAAGCCTTT TAAATGTAAT GCAAACAACT GCTAATCAAT TACGTGATTT AACGGATCAA GAAGATTATA AGCAATTAAC TGCTAAAGGG GTTCCGACAG CAAATTACAA AAAACACCTT AAAATAATTG AAAATTTAGT CCATTGGTCT CAAGACTTTA ATTTGCTGTA TGGAAAAAAA GGATTGACTA ATTTGGCACG TGATATCACT AATGTGATTC CTTCAGGCAA TGATGTTACA GTTGCTGGCG TTAAATATCC TATCTTTAAA CAATTGCATA ATCGTATCGT TGGACTTAAG CACTTAGAAG TTATTTTTAA GTATCAAGGA GAATCTCTTT TCTTGTTAGA ATTATTGCAA TCCTTTGTTT TAGATTTCTC AGAACAATAT TTACAGGAGA AGATTCAAGA AAATGCTTTT GAATTTTCTG ATATTGCCCA TTTTGCAATT CAAATATTGG AAGAAAATCA TGATATTAGG CAACTTTATC AAGATAAGTA TCATGAAGTA ATGGTTGATG AGTATCAGGA CAATAACCAT ACCCAAGAGA GAATGTTAGA ATTATTGTCT AATGGACATA ATCGTTTCAT GGTTGGAGAC ATAAAACAAT CAATTTACCG TTTTCGTCAG GCTGATCCAC AAATTTTTAA TGATAAATAC AAAGCTTACC AAGACAATCC AAGTCAAGGG AAATTAATTA TTCTGAAAGA GAATTTTCGG AGTCAATCAG AGGTTTTAGA CAGTACAAAT AGTGTGTTTA CACATCTTAT GGATGAAGAA GTAGGAGACA TTCTTTATGA TGAAAGTCAC CAATTAAAAG CTGGTAGTCC AAGACAGCAA GAAAGACATC CGAATAATAA AACACAAGTT TTACTATTAG ATACTGATGA AGATGATATA GATGACAGTG ATAGTCAACA ATATGATATT AGCCCAGCTG AAGCAAAGTT AGTCGCAAAA GAAATTATTC GATTGCATAA AGAAGAGAAT GTTCCCTTTC AAGATATCAC CCTCTTAGTT TCTTCAAGGA CAAGGAATGA TGGTATCTTA CAAACTTTTG ACCGTTATGG TATTCCTTTG GTAACTGACG GTGGGGAGCA AAATTACTTA AAATCAGTCG AAGTGATGGT AATGCTTGAT ACTTTGCGGT CAATTGATAA TCCCTTAAAT GATTATGCTC TAGTTGCTCT TTTGAGATCT CCCATGTTTG GCTTTAATGA AGATGATTTA ACAAGAATTG CTATTCAGGA TGTCAAAATG GCTTTTTATC ATAAAGTGAA ATTGTCTTAT CATAAAGAAG GTCATCATAG TGATTTAATT ACTCCAGAAT TATCTTCTAA AATAGATCAC TTTATGAAAA CATTCCAGAC TTGGCGTGAT TTTGCTAAAT GGCATTCGCT TTATGATTTA ATATGGAAAA TATATAATGA CCGTTTTTAT TATGATTATG TAGGAGCTCT GCCTAAAGCT GAGCAACGTC AAGCCAATCT ATATGCCTTG GCACTTCGAG CAAATCAGTT TGAAAAAACA GGTTTCAAGG GTTTATCACG CTTTATTCGA ATGATTGATA AAGTTTTAGA AAATGAAAAT GATTTGGCAG ATGTTGAGGT GGCATTACCG CAAAATGCTG TTAACCTAAT GACTATACAC AAATCAAAGG GGCTTGAGTT TAAGTATGTA TTTATTTTAA ATATTGATAA GAAATTTTCA ATGGTAGACA TAACTTCCCC TCTTATTTTA AGCCGAAATC AAGGAATTGG TATTAAATAT GTTGCTGATA TGCGACATGA ACTCGAAGAA GAGATACTGC CTGCAGTAAA GGTTAGCATG GAAACACTTC CTTACCAACT TAATAAAAGA GAGTTACGCT TAGCTACTTT ATCAGAGCAA ATGCGTTTAC TTTACGTAGC TATGACACGT GCAGAGAAAA AATTATATCT GGTTGGTAAG GCTAGTCAAA CCAAATGGGC TGATCATTAT GACTTAGTAT CTGAAAATAA TCATCTCCCA TTAGCTAGTC GTGAGACTTT TGTGACCTTT CAAGATTGGT TACTGGCTGT TCATGAAACC TATAAGAAAC AAGAGTTGTT TTATGACATC AACTTCGTAT CATTAGAGGA ATTAACAGAT CACCACATAG GGATGGTTAA CCCTAGTCTA CCTTTCAATC CCGATAATAA GGTAGAGAAT CGTCAGTCTG AAGATATCGT GCGTGCGATT AGCGTGTTAG AATCTGTTGA GCAGATTAAT CAAACTTATA AAGCGGCTAT TGAGTTACCG ACAGTGAGAA CACCAAGTCA AGTCAAAAAA ATCTATGAGC CTATTCTAGA TATAGAAGGT GTTGATGTGA TGGAAACTAT TACTAAAACA TCAGTAGATT TTAAGTTACC TGATTTTTCT ACAAGTAAAA AGCAAGACCC AGCAGCTTTA GGATCTGCTG TACATGAATT AATGCAACGC ATAGAGATGT CATCTCATGT CAAAATGGAA GATATTCAAA AAGCTTTGAC AGAAGTGAAT GCTGAAACAA GTGTCAAAGC GGCTATTCAG ATTGAAAAAA TCAACTATTT TTTCCAAGAA ACCTCACTCG GTAAGTATAT ACAAGAAGAA GTAGAACATC TGCATCGAGA GGCACCTTTT GCCATGTTAA AAGAAGATCC GGAGAGTGGT GAGAAATTCG TTGTACGTGG TATTATTGAT GGGTATCTAC TATTAGAAAA TCGGATAATT CTATTTGATT ATAAGACTGA TAAATTTGTC AATCCTCTAG AATTAAAAGA ACGCTATCAG GGACAAATGG CTTTATATGC AGAAGCTTTA AAAAAATCTT ACGAGATAGA AAAGATAGAC AAATACTTAA TTCTTTTAGG TGGTAAACAG CTAGAAGTGG TAAAAATGGA TTAA
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Protein sequence | MTFKPFLNPE DIAVIQTEEK NSDKKQKRTP EQIEAIYTFG NNVLVSASAG SGKTFVMVER ILDKLLRGVP IDSLFISTFT VKAAGELKER LEKKINESLK SAESDDLKQF LTQQLVGIQT ADIGTMDAFT QKIVNQYGYT LGISPIFRIL QDKNEQDVIK NEVYADLFSD YMTGKNAASF IKLVKNFSGN RKDSKAFREM VYKVYAFSQS TDNPKRWMQT VFLKGAQTYT DFEAIPDQEV SSLLNVMQTT ANQLRDLTDQ EDYKQLTAKG VPTANYKKHL KIIENLVHWS QDFNLLYGKK GLTNLARDIT NVIPSGNDVT VAGVKYPIFK QLHNRIVGLK HLEVIFKYQG ESLFLLELLQ SFVLDFSEQY LQEKIQENAF EFSDIAHFAI QILEENHDIR QLYQDKYHEV MVDEYQDNNH TQERMLELLS NGHNRFMVGD IKQSIYRFRQ ADPQIFNDKY KAYQDNPSQG KLIILKENFR SQSEVLDSTN SVFTHLMDEE VGDILYDESH QLKAGSPRQQ ERHPNNKTQV LLLDTDEDDI DDSDSQQYDI SPAEAKLVAK EIIRLHKEEN VPFQDITLLV SSRTRNDGIL QTFDRYGIPL VTDGGEQNYL KSVEVMVMLD TLRSIDNPLN DYALVALLRS PMFGFNEDDL TRIAIQDVKM AFYHKVKLSY HKEGHHSDLI TPELSSKIDH FMKTFQTWRD FAKWHSLYDL IWKIYNDRFY YDYVGALPKA EQRQANLYAL ALRANQFEKT GFKGLSRFIR MIDKVLENEN DLADVEVALP QNAVNLMTIH KSKGLEFKYV FILNIDKKFS MVDITSPLIL SRNQGIGIKY VADMRHELEE EILPAVKVSM ETLPYQLNKR ELRLATLSEQ MRLLYVAMTR AEKKLYLVGK ASQTKWADHY DLVSENNHLP LASRETFVTF QDWLLAVHET YKKQELFYDI NFVSLEELTD HHIGMVNPSL PFNPDNKVEN RQSEDIVRAI SVLESVEQIN QTYKAAIELP TVRTPSQVKK IYEPILDIEG VDVMETITKT SVDFKLPDFS TSKKQDPAAL GSAVHELMQR IEMSSHVKME DIQKALTEVN AETSVKAAIQ IEKINYFFQE TSLGKYIQEE VEHLHREAPF AMLKEDPESG EKFVVRGIID GYLLLENRII LFDYKTDKFV NPLELKERYQ GQMALYAEAL KKSYEIEKID KYLILLGGKQ LEVVKMD
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