Gene SAG0874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG0874 
SymbolrexA 
ID1013678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp877218 
End bp880841 
Gene Length3624 bp 
Protein Length1207 aa 
Translation table11 
GC content34% 
IMG OID637316061 
Productexonuclease RexA 
Protein accessionNP_687888 
Protein GI22537037 
COG category[L] Replication, recombination and repair 
COG ID[COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 
TIGRFAM ID[TIGR02785] recombination helicase AddA, Firmicutes type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.149314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTTTA AGCCTTTCTT AAATCCAGAA GATATTGCTG TTATTCAGAC AGAAGAAAAA 
AATTCTGATA AAAAACAAAA GCGAACGCCT GAACAAATTG AAGCCATTTA TACTTTTGGT
AACAATGTCC TGGTATCAGC TTCGGCTGGT TCTGGAAAGA CTTTTGTAAT GGTTGAGCGG
ATTTTAGATA AACTTTTAAG AGGGGTTCCG ATTGACTCTT TGTTTATCTC AACATTTACA
GTAAAAGCGG CAGGTGAGCT CAAAGAACGT TTAGAAAAGA AAATAAACGA GTCTTTGAAA
TCCGCAGAAT CAGATGATTT AAAACAGTTT CTCACCCAGC AACTTGTCGG CATTCAAACA
GCTGATATTG GTACTATGGA TGCTTTTACG CAAAAAATAG TTAACCAATA TGGTTATACT
TTGGGCATAT CACCTATATT TAGGATTTTA CAAGATAAAA ATGAGCAAGA CGTCATAAAG
AATGAGGTCT ATGCTGATTT ATTTTCTGAC TACATGACTG GGAAGAATGC AGCTTCATTC
ATAAAATTAG TCAAAAATTT CTCAGGTAAT CGTAAAGATA GCAAAGCTTT TCGAGAAATG
GTTTATAAAG TTTATGCTTT TAGCCAGTCC ACCGATAACC CCAAGCGCTG GATGCAAACA
GTTTTTCTAA AAGGTGCACA AACTTACACT GATTTTGAAG CTATTCCAGA TCAAGAAGTT
TCAAGCCTTT TAAATGTAAT GCAAACAACT GCTAATCAAT TACGTGATTT AACGGATCAA
GAAGATTATA AGCAATTAAC TGCTAAAGGG GTTCCGACAG CAAATTACAA AAAACACCTT
AAAATAATTG AAAATTTAGT CCATTGGTCT CAAGACTTTA ATTTGCTGTA TGGAAAAAAA
GGATTGACTA ATTTGGCACG TGATATCACT AATGTGATTC CTTCAGGCAA TGATGTTACA
GTTGCTGGCG TTAAATATCC TATCTTTAAA CAATTGCATA ATCGTATCGT TGGACTTAAG
CACTTAGAAG TTATTTTTAA GTATCAAGGA GAATCTCTTT TCTTGTTAGA ATTATTGCAA
TCCTTTGTTT TAGATTTCTC AGAACAATAT TTACAGGAGA AGATTCAAGA AAATGCTTTT
GAATTTTCTG ATATTGCCCA TTTTGCAATT CAAATATTGG AAGAAAATCA TGATATTAGG
CAACTTTATC AAGATAAGTA TCATGAAGTA ATGGTTGATG AGTATCAGGA CAATAACCAT
ACCCAAGAGA GAATGTTAGA ATTATTGTCT AATGGACATA ATCGTTTCAT GGTTGGAGAC
ATAAAACAAT CAATTTACCG TTTTCGTCAG GCTGATCCAC AAATTTTTAA TGATAAATAC
AAAGCTTACC AAGACAATCC AAGTCAAGGG AAATTAATTA TTCTGAAAGA GAATTTTCGG
AGTCAATCAG AGGTTTTAGA CAGTACAAAT AGTGTGTTTA CACATCTTAT GGATGAAGAA
GTAGGAGACA TTCTTTATGA TGAAAGTCAC CAATTAAAAG CTGGTAGTCC AAGACAGCAA
GAAAGACATC CGAATAATAA AACACAAGTT TTACTATTAG ATACTGATGA AGATGATATA
GATGACAGTG ATAGTCAACA ATATGATATT AGCCCAGCTG AAGCAAAGTT AGTCGCAAAA
GAAATTATTC GATTGCATAA AGAAGAGAAT GTTCCCTTTC AAGATATCAC CCTCTTAGTT
TCTTCAAGGA CAAGGAATGA TGGTATCTTA CAAACTTTTG ACCGTTATGG TATTCCTTTG
GTAACTGACG GTGGGGAGCA AAATTACTTA AAATCAGTCG AAGTGATGGT AATGCTTGAT
ACTTTGCGGT CAATTGATAA TCCCTTAAAT GATTATGCTC TAGTTGCTCT TTTGAGATCT
CCCATGTTTG GCTTTAATGA AGATGATTTA ACAAGAATTG CTATTCAGGA TGTCAAAATG
GCTTTTTATC ATAAAGTGAA ATTGTCTTAT CATAAAGAAG GTCATCATAG TGATTTAATT
ACTCCAGAAT TATCTTCTAA AATAGATCAC TTTATGAAAA CATTCCAGAC TTGGCGTGAT
TTTGCTAAAT GGCATTCGCT TTATGATTTA ATATGGAAAA TATATAATGA CCGTTTTTAT
TATGATTATG TAGGAGCTCT GCCTAAAGCT GAGCAACGTC AAGCCAATCT ATATGCCTTG
GCACTTCGAG CAAATCAGTT TGAAAAAACA GGTTTCAAGG GTTTATCACG CTTTATTCGA
ATGATTGATA AAGTTTTAGA AAATGAAAAT GATTTGGCAG ATGTTGAGGT GGCATTACCG
CAAAATGCTG TTAACCTAAT GACTATACAC AAATCAAAGG GGCTTGAGTT TAAGTATGTA
TTTATTTTAA ATATTGATAA GAAATTTTCA ATGGTAGACA TAACTTCCCC TCTTATTTTA
AGCCGAAATC AAGGAATTGG TATTAAATAT GTTGCTGATA TGCGACATGA ACTCGAAGAA
GAGATACTGC CTGCAGTAAA GGTTAGCATG GAAACACTTC CTTACCAACT TAATAAAAGA
GAGTTACGCT TAGCTACTTT ATCAGAGCAA ATGCGTTTAC TTTACGTAGC TATGACACGT
GCAGAGAAAA AATTATATCT GGTTGGTAAG GCTAGTCAAA CCAAATGGGC TGATCATTAT
GACTTAGTAT CTGAAAATAA TCATCTCCCA TTAGCTAGTC GTGAGACTTT TGTGACCTTT
CAAGATTGGT TACTGGCTGT TCATGAAACC TATAAGAAAC AAGAGTTGTT TTATGACATC
AACTTCGTAT CATTAGAGGA ATTAACAGAT CACCACATAG GGATGGTTAA CCCTAGTCTA
CCTTTCAATC CCGATAATAA GGTAGAGAAT CGTCAGTCTG AAGATATCGT GCGTGCGATT
AGCGTGTTAG AATCTGTTGA GCAGATTAAT CAAACTTATA AAGCGGCTAT TGAGTTACCG
ACAGTGAGAA CACCAAGTCA AGTCAAAAAA ATCTATGAGC CTATTCTAGA TATAGAAGGT
GTTGATGTGA TGGAAACTAT TACTAAAACA TCAGTAGATT TTAAGTTACC TGATTTTTCT
ACAAGTAAAA AGCAAGACCC AGCAGCTTTA GGATCTGCTG TACATGAATT AATGCAACGC
ATAGAGATGT CATCTCATGT CAAAATGGAA GATATTCAAA AAGCTTTGAC AGAAGTGAAT
GCTGAAACAA GTGTCAAAGC GGCTATTCAG ATTGAAAAAA TCAACTATTT TTTCCAAGAA
ACCTCACTCG GTAAGTATAT ACAAGAAGAA GTAGAACATC TGCATCGAGA GGCACCTTTT
GCCATGTTAA AAGAAGATCC GGAGAGTGGT GAGAAATTCG TTGTACGTGG TATTATTGAT
GGGTATCTAC TATTAGAAAA TCGGATAATT CTATTTGATT ATAAGACTGA TAAATTTGTC
AATCCTCTAG AATTAAAAGA ACGCTATCAG GGACAAATGG CTTTATATGC AGAAGCTTTA
AAAAAATCTT ACGAGATAGA AAAGATAGAC AAATACTTAA TTCTTTTAGG TGGTAAACAG
CTAGAAGTGG TAAAAATGGA TTAA
 
Protein sequence
MTFKPFLNPE DIAVIQTEEK NSDKKQKRTP EQIEAIYTFG NNVLVSASAG SGKTFVMVER 
ILDKLLRGVP IDSLFISTFT VKAAGELKER LEKKINESLK SAESDDLKQF LTQQLVGIQT
ADIGTMDAFT QKIVNQYGYT LGISPIFRIL QDKNEQDVIK NEVYADLFSD YMTGKNAASF
IKLVKNFSGN RKDSKAFREM VYKVYAFSQS TDNPKRWMQT VFLKGAQTYT DFEAIPDQEV
SSLLNVMQTT ANQLRDLTDQ EDYKQLTAKG VPTANYKKHL KIIENLVHWS QDFNLLYGKK
GLTNLARDIT NVIPSGNDVT VAGVKYPIFK QLHNRIVGLK HLEVIFKYQG ESLFLLELLQ
SFVLDFSEQY LQEKIQENAF EFSDIAHFAI QILEENHDIR QLYQDKYHEV MVDEYQDNNH
TQERMLELLS NGHNRFMVGD IKQSIYRFRQ ADPQIFNDKY KAYQDNPSQG KLIILKENFR
SQSEVLDSTN SVFTHLMDEE VGDILYDESH QLKAGSPRQQ ERHPNNKTQV LLLDTDEDDI
DDSDSQQYDI SPAEAKLVAK EIIRLHKEEN VPFQDITLLV SSRTRNDGIL QTFDRYGIPL
VTDGGEQNYL KSVEVMVMLD TLRSIDNPLN DYALVALLRS PMFGFNEDDL TRIAIQDVKM
AFYHKVKLSY HKEGHHSDLI TPELSSKIDH FMKTFQTWRD FAKWHSLYDL IWKIYNDRFY
YDYVGALPKA EQRQANLYAL ALRANQFEKT GFKGLSRFIR MIDKVLENEN DLADVEVALP
QNAVNLMTIH KSKGLEFKYV FILNIDKKFS MVDITSPLIL SRNQGIGIKY VADMRHELEE
EILPAVKVSM ETLPYQLNKR ELRLATLSEQ MRLLYVAMTR AEKKLYLVGK ASQTKWADHY
DLVSENNHLP LASRETFVTF QDWLLAVHET YKKQELFYDI NFVSLEELTD HHIGMVNPSL
PFNPDNKVEN RQSEDIVRAI SVLESVEQIN QTYKAAIELP TVRTPSQVKK IYEPILDIEG
VDVMETITKT SVDFKLPDFS TSKKQDPAAL GSAVHELMQR IEMSSHVKME DIQKALTEVN
AETSVKAAIQ IEKINYFFQE TSLGKYIQEE VEHLHREAPF AMLKEDPESG EKFVVRGIID
GYLLLENRII LFDYKTDKFV NPLELKERYQ GQMALYAEAL KKSYEIEKID KYLILLGGKQ
LEVVKMD