| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG0750 |
|---|
| Symbol | lysS |
|---|
| ID | 1013554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus agalactiae 2603V/R |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004116 |
|---|
| Strand | - |
|---|
| Start bp | 743105 |
|---|
| End bp | 744595 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637315938 |
|---|
| Product | lysyl-tRNA synthetase |
|---|
| Protein accession | NP_687765 |
|---|
| Protein GI | 22536914 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
|---|
| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAACC AACATATTGA AGAATTAAAT GACCAACAGA TTGTTCGTCG TGAAAAAATG
GCTGCTTTGA CTGAACAAGG CATTGATCCT TTTGGTAAAC GATTTGAACG TACAGCAACA
TCTGGTCAAT TAAATGAAAA ATACGCTGAC AAATCAAAAG AAGACTTGCA CGACATTGAA
GAAACTGCTA CAATCGCTGG TCGTTTAATG ACTAAGCGCG GTAAGGGGAA AGTTGGCTTT
GCGCATATCC AAGATCGCGA AGGTCAAATT CAAATTTATG TCCGTAAAGA TTCTGTTGGC
GAAGAAAACT ACGAAATCTT TAAAAAAGCT GATTTAGGTG ACTTCCTTGG TGTTGAAGGG
CAAGTAATGC GTACAGATAT GGGAGAACTT TCTATCAAGG CTACTCATAT TACTCACCTT
TCAAAAGCAC TCCGTCCACT TCCTGAAAAA TTCCACGGCC TAACTGATAT TGAAACAATC
TATCGTAAAC GTCATCTTGA TTTAATCTCA AATCGTGACA GCTTTGACCG TTTTGTAACA
CGCTCAAAAA TCATTTCAGA AATTCGTCGC TTTATGGATA GCAATGGTTT CTTAGAGGTT
GAAACACCTG TTCTTCATAA TGAAGCTGGT GGTGCTTCTG CTCGCCCATT TATCACACAT
CACAATGCAC AAGACATTGA CATGGTTCTT CGTATCGCAA CTGAATTGCA TCTAAAACGT
CTTATTGTAG GTGGTATGGA GCGTGTTTAT GAAATCGGAC GTATTTTCCG TAATGAAGGG
ATGGATGCAA CCCACAATCC AGAGTTCACA TCTATTGAAG CCTACCAAGC CTATGCTGAC
TACCAGGATA TTATGGACTT GACAGAAGGT ATTATCCAGC ATGTTACAAA AACTGTAAAA
GGTGATGGAC CAATTAATTA TCAAGGCACA GAAATTAAAA TTAATGAACC ATTCAAACGT
GTTCATATGG TTGATGCGGT TAAAGAAATC ACTGGTATTG ACTTCTGGAA AGAAATGACT
CTTGAAGAAG CACAAGCTTT GGCACAAGAA AAAAATGTTC CGCTTGAAAA ACATTTCACA
ACAGTTGGTC ACATCATTAA TGCCTTCTTC GAAGAATTTG TTGAAGACAC TTTAATTCAA
CCAACTTTTG TCTTTGGTCA TCCAGTTGAA GTGTCTCCAC TTGCTAAGAA AAATGATACA
GACCCTCGTT TTACAGACCG TTTCGAACTC TTTATCATGA CTAAAGAATA CGCTAATGCT
TTTACAGAAT TAAATGACCC AATTGATCAG CTATCTCGCT TTGAAGCACA AGCATCTGCT
AAAGAACTTG GCGATGATGA AGCAACTGGA GTTGATTACG ATTATGTTGA AGCACTTGAA
TATGGTATGC CACCTACTGG TGGACTAGGT ATTGGTATCG ACCGTCTCTG TATGCTGTTA
ACTGATACAA CAACTATCCG AGACGTCCTA CTTTTCCCTA CAATGAAATA A
|
|---|
| Protein sequence | MSNQHIEELN DQQIVRREKM AALTEQGIDP FGKRFERTAT SGQLNEKYAD KSKEDLHDIE
ETATIAGRLM TKRGKGKVGF AHIQDREGQI QIYVRKDSVG EENYEIFKKA DLGDFLGVEG
QVMRTDMGEL SIKATHITHL SKALRPLPEK FHGLTDIETI YRKRHLDLIS NRDSFDRFVT
RSKIISEIRR FMDSNGFLEV ETPVLHNEAG GASARPFITH HNAQDIDMVL RIATELHLKR
LIVGGMERVY EIGRIFRNEG MDATHNPEFT SIEAYQAYAD YQDIMDLTEG IIQHVTKTVK
GDGPINYQGT EIKINEPFKR VHMVDAVKEI TGIDFWKEMT LEEAQALAQE KNVPLEKHFT
TVGHIINAFF EEFVEDTLIQ PTFVFGHPVE VSPLAKKNDT DPRFTDRFEL FIMTKEYANA
FTELNDPIDQ LSRFEAQASA KELGDDEATG VDYDYVEALE YGMPPTGGLG IGIDRLCMLL
TDTTTIRDVL LFPTMK
|
|---|
| |