Gene SAG0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG0396 
Symboltgt 
ID1013191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp405339 
End bp406481 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content38% 
IMG OID637315594 
Productqueuine tRNA-ribosyltransferase 
Protein accessionNP_687430 
Protein GI22536579 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00449] tRNA-guanine transglycosylases, various specificities
[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000954967 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGATC ATCCAATAAA ATATCGATTA ATTAAACAGG AAAAACACAC AGGAGCCAGA 
CTTGGTGAAA TAATCACACC ACATGGTACA TTTCCGACAC CAATGTTTAT GCCTGTTGGG
ACACAAGCAA CTGTTAAGAC ACAATCTCCT GAAGAACTAA AAGAAATGGG TTCAGGAATT
ATTCTATCAA ATACCTACCA TTTATGGTTA CGTCCAGGTG ATGAATTGAT TGCTAAAGCT
GGAGGTTTAC ATAAATTCAT GAACTGGGAT CAGGCTATTC TAACAGACAG TGGAGGCTTT
CAGGTTTATT CTTTGGCTGA TAGTCGAAAC ATCACTGAAG AAGGAGTAAC CTTTAAAAAC
CATTTAAATG GTGCGAAAAT GTTTTTATCA CCAGAAAAAG CTATTTCAAT TCAAAATAAC
CTTGGTTCTG ATATTATGAT GAGTTTTGAT GAGTGTCCAC AATTTTACCA GCCTTATGAT
TATGTAAAAA AATCAATTGA GCGAACAAGC CGTTGGGCAG AACGTGGATT AAATGCCCAC
CGCCGTCCTC ATGATCAAGG ACTATTTGGT ATTGTTCAAG GGGCAGGGTT TGAGGATTTA
CGTCGTCAAT CAGCACGAGA TTTAGTATCG ATGGATTTTC CAGGTTATTC AATTGGAGGG
CTTGCGGTCG GAGAAACACA TGATGAGATG AATGCAGTTC TTGATTTTAC TGTTCCAATG
CTTCCGAATG ATAAGCCTCG TTATTTGATG GGAGTTGGTG CACCAGATAG TTTAATAGAC
GCCGTTATCC GAGGAGTAGA TATGTTTGAT TGCGTCTTAC CTACTCGTAT TGCTCGAAAT
GGGACATGTA TGACAAGTCA AGGTCGCTTA GTTGTTAAGA ATGCTAAATT TGCAGAAGAT
TTTACGCCTC TTGATCCAAA TTGCGATTGC TATACTTGTA AAAATTATAC ACGCGCTTAT
ATTCGTCACT TATTGAAAGC AGATGAAACT TTTGGTATTC GTTTGACTAG TTACCATAAT
CTTTATTTCC TTGTCAATCT TATGAAAGAT GTCAGACAAG CTATTATGGA TGATAATCTT
CTAGAATTCC GTCAAGATTT TATGGAGCGC TATGGCTATG GCATGAATAA CCGTAATTTT
TAA
 
Protein sequence
MTDHPIKYRL IKQEKHTGAR LGEIITPHGT FPTPMFMPVG TQATVKTQSP EELKEMGSGI 
ILSNTYHLWL RPGDELIAKA GGLHKFMNWD QAILTDSGGF QVYSLADSRN ITEEGVTFKN
HLNGAKMFLS PEKAISIQNN LGSDIMMSFD ECPQFYQPYD YVKKSIERTS RWAERGLNAH
RRPHDQGLFG IVQGAGFEDL RRQSARDLVS MDFPGYSIGG LAVGETHDEM NAVLDFTVPM
LPNDKPRYLM GVGAPDSLID AVIRGVDMFD CVLPTRIARN GTCMTSQGRL VVKNAKFAED
FTPLDPNCDC YTCKNYTRAY IRHLLKADET FGIRLTSYHN LYFLVNLMKD VRQAIMDDNL
LEFRQDFMER YGYGMNNRNF