| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG0275 |
|---|
| Symbol | glpF-1 |
|---|
| ID | 1013064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus agalactiae 2603V/R |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004116 |
|---|
| Strand | + |
|---|
| Start bp | 281496 |
|---|
| End bp | 282194 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637315468 |
|---|
| Product | glycerol uptake facilitator protein |
|---|
| Protein accession | NP_687310 |
|---|
| Protein GI | 22536459 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
|---|
| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTT TTGGAGAATT CTTAGGAACA GCTCTCTTAG TCTTACTTGG TAATGGTGTT
GTAGCAGGTG TTGTTTTGCC TAAAACGAAG AATCATAATT CTGGATGGAT TGTTATCACA
TTTGGATGGG GACTTGCTGT AGCTATTGCA GCGTTGGTAT CTGGCAATAT TAGCCCTGCC
CACTTGAATC CAGCTGTGTC ATTAGCTTTT GCGATCAAAG GTGATTTAGC TTGGGGAACA
GCTATTCTTT ATATGATTGC ACAGATTATT GGTGCAATGC TAGGTTCACT TCTTGTTTAT
TTGCAATTTA GACCCCATTA TGAGGCTGCA GAAAATAGAG CAGACATCCT TGGAACTTTT
GCAACTGGTC CGGCTTTGAA GGATAATTTT TCCAATTTTT TAAGTGAAGT ATTGGGAACA
CTTGTTCTTG TACTTACTAT TTTTGCCATC GGAAAATACA ATATGCCTCC AGGAGTTGGT
ACGATGAGTG TTGGTATGTT AGTGGTTGGG ATTGGTCTAT CGCTCGGTGG AACAACAGGT
TATGCTATTA ATCCTGCACG TGATTTTGGT CCTCGTTTAT TGCATGCCTT GTTACCGATG
AAGAACAAAG GTGATTCTGA TTGGACTTAT TCATGGATTC CGATAGTAGG ACCTATGGTA
GGAGCTATTT TAGCAGCCTT AATATTTGCT ATGATGTAA
|
|---|
| Protein sequence | MDIFGEFLGT ALLVLLGNGV VAGVVLPKTK NHNSGWIVIT FGWGLAVAIA ALVSGNISPA
HLNPAVSLAF AIKGDLAWGT AILYMIAQII GAMLGSLLVY LQFRPHYEAA ENRADILGTF
ATGPALKDNF SNFLSEVLGT LVLVLTIFAI GKYNMPPGVG TMSVGMLVVG IGLSLGGTTG
YAINPARDFG PRLLHALLPM KNKGDSDWTY SWIPIVGPMV GAILAALIFA MM
|
|---|
| |