| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG0160 |
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| Symbol | rpoB |
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| ID | 1012934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus agalactiae 2603V/R |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004116 |
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| Strand | + |
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| Start bp | 179288 |
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| End bp | 182863 |
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| Gene Length | 3576 bp |
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| Protein Length | 1191 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637315338 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | NP_687195 |
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| Protein GI | 22536344 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCAGGAC ATGAAGTTCA GTACGGAAAA CACCGTACAC GTCGTAGCTT TTCAAGAATT
AAGGAAGTTC TTGATTTACC AAACTTAATT GAAATTCAAA CTGATTCATT CCAAGATTTT
CTTGATGCTG GCTTGAAAGA AGTATTTGAG GATGTACTTC CAATTTCAAA CTTTACAGAT
ACTATGGATC TTGAATTTGT TGGTTATGAA TTAAAAGAAC CTAAATATAC TTTGGAAGAA
GCTCGTATCC ATGATGCTAG CTACTCAGCA CCTATTTTTG TTACTTTCCG TTTAGTTAAT
AAAGAAACTG GTGAAATTAA AACTCAAGAA GTTTTCTTTG GTGATTTTCC AATTATGACT
GAAATGGGTA CTTTCATCAT CAATGGTGGT GAACGTATCA TTGTTTCACA ATTAGTCCGT
TCTCCTGGTG TTTACTTTAA TGATAAGGTA GATAAAAATG GAAAAGTTGG TTATGGGTCA
ACTGTTATCC CTAACCGTGG AGCTTGGTTG GAACTTGAGA CAGACGCAAA AGATATTGCT
TATACACGTA TCGACCGCAC ACGTAAAATT CCATTTACAA CACTAGTCCG TGCACTTGGT
TTCTCTGGAG ACGATGAAAT TGTTGACATC TTTGGTGACA GTGAACTTGT TCGCAATACT
ATTGAAAAAG ACATTCATAA AAATCCAAGT GATTCTCGTA CAGATGAAGC ACTTAAAGAA
ATCTATGAAC GTCTTCGTCC AGGTGAACCA AAAACTGCAG ACAGCTCACG TAGTCTTTTA
GTTGCACGTT TCTTTGATCC ACGTCGTTAT GACTTAGCGG CTGTTGGTCG TTATAAGATT
AATAAAAAAC TGAATCTTAA AACACGCCTA TTGAACCAAA CAATCGCTGA AAATTTAGTT
GATGGTGAAA CAGGAGAGAT TCTTGTTGAA GCTGGAACCG TTATGACACG AGATGTCATT
GATTCAATTG CAGAGCATAT CGATGGAGAC TTAAACAAGT TTGTCTACAC ACCAAATGAT
TATGCTGTAG TTACTGAACC AGTTATTCTT CAAAAATTCA AAGTTGTTGC TCCAACTGAT
CCAGACCGTG TTGTTACTAT TGTTGGAAAC TCAAATCCTG AAGATAAAGT TCGTGCCTTA
ACTCCTGCAG ATATTTTAGC AGAGATGTCA TACTTCTTAA ACCTTGCAGA GGGTATCGGT
AAGGTAGATG ACATTGACCA TTTAGGTAAC CGTCGTATTC GTGCAGTTGG TGAATTACTT
GCGAACCAAT TCCGTATCGG ACTTGCTCGT ATGGAACGCA ATGTCCGCGA ACGTATGTCT
GTACAAGACA ATGAAGTCTT GACACCTCAA CAAATCATTA ACATTCGTCC AGTGACTGCC
GCCGTTAAAG AATTCTTTGG TTCATCACAG CTGTCACAAT TCATGGACCA ACACAACCCT
CTATCAGAAT TGTCGCACAA ACGCCGTCTC TCTGCCTTAG GACCTGGTGG TTTGACACGT
GACCGTGCTG GATATGAAGT TCGTGACGTG CACTATACCC ACTATGGGCG CATGTGTCCG
ATTGAAACAC CTGAAGGTCC AAACATTGGT TTGATTAATA ACTTATCTTC ATTTGGACAC
CTCAATAAAT ATGGATTTAT TCAAACACCA TATCGTAAAG TAGATCGTTC TACTGGTGCG
GTAACGAACG AAATTGTTTG GTTGACTGCT GATGAAGAAG ATGAATTTAC AGTTGCACAA
GCCAACTCTA AGCTTAACGA AGACGGTACA TTTGCAGAAG AAATCGTTAT GGGTCGTCAT
CAAGGTAATA ACCAAGAGTT TCCTTCAAGC ATTGTTGACT TTGTTGACGT GTCACCTAAG
CAAGTAGTTG CTGTCGCAAC AGCATGTATT CCTTTCTTGG AAAATGATGA CTCTAACCGT
GCCTTGATGG GTGCCAACAT GCAACGTCAG GCTGTGCCAT TGATTGATCC AAAAGCACCA
TATGTTGGTA CTGGTATGGA GTATCAAGCA GCCCACGATT CAGGTGCAGC TGTGATTGCT
AAACATGATG GTCGTGTTAT TTTTTCAGAT GCTGAAAAAG TTGAAGTGCG TCGCGAAGAT
GGTTCTCTTG ATGTTTATCA TGTTCAAAAA TTCCGCCGTT CAAACTCAGG TACTGCTTAT
AACCAACGTA CCTTAGTTAA AGTTGGTGAT CTCGTTGAAA AAGGTGATTT TATCGCCGAC
GGACCATCTA TGGAAAATGG TGAAATGGCT CTTGGACAAA ACCCAGTTGT TGCTTATATG
ACTTGGGAAG GTTATAACTT CGAGGATGCC GTTATCATGA GTGAGCGCCT TGTGAAAGAA
GATGTCTATA CATCTGTTCA CTTGGAAGAA TTCGAATCTG AAACGCGTGA TACAAAGCTT
GGGCCTGAAG AAATTACTCG TGAAATTCCA AATGTTGGTG AAGATTCACT ACGTGATCTC
GATGAAATGG GAATTATCCG CATTGGTGCT GAGGTAAAAG AAGGTGACAT TCTTGTTGGT
AAGGTAACAC CTAAGGGTGA AAAGGACTTA TCTGCTGAAG AACGTCTCTT GCATGCCATT
TTTGGTGATA AATCACGTGA AGTTCGTGAT ACTTCACTAC GTGTACCTCA CGGTGGCGAT
GGAGTAGTTC GTGACGTTAA AATCTTTACT CGTGCAAATG GTGATGAATT GCAATCAGGT
GTTAATATGC TTGTCCGCGT TTATATCGCT CAAAAACGTA AAATCAAAGT CGGTGATAAG
ATGGCCGGTC GTCACGGAAA CAAAGGTGTC GTCTCACGTA TTGTTCCTGT TGAAGATATG
CCTTACTTAC CAGATGGAAC GCCAGTTGAT ATCATGTTGA ACCCACTTGG GGTGCCATCA
CGTATGAATA TCGGACAAGT TATGGAGCTT CATTTAGGTA TGGCTGCTCG TAATTTAGGT
ATTCATATTG CAACGCCAGT CTTTGATGGG GCTTCTTCAG AAGACCTTTG GGAAACTGTT
CAAGAAGCAG GTATGGATTC AGATGCTAAG ACTGTTCTTT ATGATGGTCG TACTGGTGAA
CCATTCGATA ACCGTGTGTC AGTTGGTGTC ATGTACATGA TCAAACTTCA CCACATGGTT
GATGATAAAC TTCATGCCCG TTCAGTAGGA CCATACTCAC TTGTTACTCA ACAACCACTT
GGAGGTAAAG CTCAATTTGG TGGACAACGT TTTGGTGAGA TGGAGGTTTG GGCGCTTGAA
GCTTATGGTG CTTCAAATGT TCTTCAAGAA ATTTTAACAT ACAAATCTGA TGATGTTACA
GGACGTCTTA AAGCTTATGA AGCTATCACA AAAGGTAAGC CAATTCCAAA ACCAGGTGTT
CCAGAATCAT TCCGTGTTCT TGTAAAAGAA TTGCAATCAC TTGGTCTTGA TATGCGTGTC
CTTGATGAAG ATGACAACGA AGTTGAACTC CGTGATCTTG ATGAAGGTGA AGATGATGAT
GTGATGCACG TTGATGACCT TGAAAAAGCA CGTGTGAAAC AAGAAGCTGA AGAAAAACAA
GCTGAACAAG TATCTGAAGT CGTTCAAGAA GATTAA
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| Protein sequence | MAGHEVQYGK HRTRRSFSRI KEVLDLPNLI EIQTDSFQDF LDAGLKEVFE DVLPISNFTD
TMDLEFVGYE LKEPKYTLEE ARIHDASYSA PIFVTFRLVN KETGEIKTQE VFFGDFPIMT
EMGTFIINGG ERIIVSQLVR SPGVYFNDKV DKNGKVGYGS TVIPNRGAWL ELETDAKDIA
YTRIDRTRKI PFTTLVRALG FSGDDEIVDI FGDSELVRNT IEKDIHKNPS DSRTDEALKE
IYERLRPGEP KTADSSRSLL VARFFDPRRY DLAAVGRYKI NKKLNLKTRL LNQTIAENLV
DGETGEILVE AGTVMTRDVI DSIAEHIDGD LNKFVYTPND YAVVTEPVIL QKFKVVAPTD
PDRVVTIVGN SNPEDKVRAL TPADILAEMS YFLNLAEGIG KVDDIDHLGN RRIRAVGELL
ANQFRIGLAR MERNVRERMS VQDNEVLTPQ QIINIRPVTA AVKEFFGSSQ LSQFMDQHNP
LSELSHKRRL SALGPGGLTR DRAGYEVRDV HYTHYGRMCP IETPEGPNIG LINNLSSFGH
LNKYGFIQTP YRKVDRSTGA VTNEIVWLTA DEEDEFTVAQ ANSKLNEDGT FAEEIVMGRH
QGNNQEFPSS IVDFVDVSPK QVVAVATACI PFLENDDSNR ALMGANMQRQ AVPLIDPKAP
YVGTGMEYQA AHDSGAAVIA KHDGRVIFSD AEKVEVRRED GSLDVYHVQK FRRSNSGTAY
NQRTLVKVGD LVEKGDFIAD GPSMENGEMA LGQNPVVAYM TWEGYNFEDA VIMSERLVKE
DVYTSVHLEE FESETRDTKL GPEEITREIP NVGEDSLRDL DEMGIIRIGA EVKEGDILVG
KVTPKGEKDL SAEERLLHAI FGDKSREVRD TSLRVPHGGD GVVRDVKIFT RANGDELQSG
VNMLVRVYIA QKRKIKVGDK MAGRHGNKGV VSRIVPVEDM PYLPDGTPVD IMLNPLGVPS
RMNIGQVMEL HLGMAARNLG IHIATPVFDG ASSEDLWETV QEAGMDSDAK TVLYDGRTGE
PFDNRVSVGV MYMIKLHHMV DDKLHARSVG PYSLVTQQPL GGKAQFGGQR FGEMEVWALE
AYGASNVLQE ILTYKSDDVT GRLKAYEAIT KGKPIPKPGV PESFRVLVKE LQSLGLDMRV
LDEDDNEVEL RDLDEGEDDD VMHVDDLEKA RVKQEAEEKQ AEQVSEVVQE D
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