| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG0105 |
|---|
| Symbol | tig |
|---|
| ID | 1012873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus agalactiae 2603V/R |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004116 |
|---|
| Strand | + |
|---|
| Start bp | 113600 |
|---|
| End bp | 114883 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637315278 |
|---|
| Product | trigger factor |
|---|
| Protein accession | NP_687141 |
|---|
| Protein GI | 22536290 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
|---|
| TIGRFAM ID | [TIGR00115] trigger factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00110725 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACAT CATTTGAAAA TAAAGCTACA AACCGTGGTA TTATCACATT TACAATTAGT
CAAGATGAGA TCAAGCCAGC TCTTGATCAA GCATTCAACA AAGTAAAAAA AGATTTGAAC
GTTCCAGGAT TCCGTAAAGG ACATATGCCT CGTACAGTTT TCAACCAAAA ATTTGGTGAA
GAAGCACTCT ACGAAAATGC ATTGAATTTA GTGTTGCCAA AGGCTTACGA AGCAGCTGTT
GCAGAACTTG GTTTAGACGT TGTTGCTCAA CCAAAAATTG ATGTTGTATC AATGGAAAAA
GGTCAAGATT GGAAGTTGAC AGCTGAAGTT GTTACAAAAC CAGAAGTTAA ACTTGGAGAT
TACAAAGACC TTTCAGTAGA AGTTGATGCT TCAAAAGAAG TTTCAGATGA AGAAGTTGAT
GCTAAAGTTG AACGTGAGCG TAACAACCTT GCAGAATTGA CTGTTAAAGA TGGTGAAGCA
GCACAAGGTG ATACAGTTGT TATTGACTTT GTAGGTTCAG TTGATGGTGT TGAATTTGAT
GGTGGTAAAG GAGATAACTT CTCACTTGAA CTTGGTTCAG GTCAATTTAT CCCAGGATTT
GAAGAACAAT TAGTAGGTTC TAAAGCTGGT CAAACTGTAG ACGTTAATGT AACATTCCCA
GAAGATTATC AAGCAGAAGA TCTTGCTGGT AAAGATGCTA AATTTGTTAC AACAATTCAC
GAAGTAAAAA CTAAAGAAGT TCCAGCACTT GATGATGAAC TTGCAAAAGA TATTGATGAT
GAAGTTGAAA CACTTGATGA GTTGAAAGCG AAATATCGCA AAGAGCTAGA ATCAGCAAAA
GAAATTGCAT TTGATGATGC AGTTGAAGGT GCAGCAATCG AATTAGCTGT TGCCAATGCA
GAAATTGTTG AATTACCAGA AGAAATGGTC CATGATGAAG TACATCGTGC TATGAATGAG
TTCATGGGTA ATATGCAACG TCAAGGAATT TCACCAGAAA TGTACTTCCA ATTAACAGGT
ACAACTGAAG AAGACCTTCA TAAGCAATAC CAAGCAGATG CTGACAAACG CGTTAAAACT
AACCTTGTTA TCGAAGCAAT TGCAGCTGCA GAAGGCTTTG AAGCAACAGA TGAAGAAATC
GAAAAAGAAA TCACAGATCT TGCTTCAGAA TACAATATGG AAGCTGACCA AGTACGCGGT
CTACTTTCAG CAGATATGCT TAAACATGAT ATTGCAATGA AAAAAGCGGT TGACGTTATC
ACTAGCTCAG CTACTGTAAA ATAA
|
|---|
| Protein sequence | MSTSFENKAT NRGIITFTIS QDEIKPALDQ AFNKVKKDLN VPGFRKGHMP RTVFNQKFGE
EALYENALNL VLPKAYEAAV AELGLDVVAQ PKIDVVSMEK GQDWKLTAEV VTKPEVKLGD
YKDLSVEVDA SKEVSDEEVD AKVERERNNL AELTVKDGEA AQGDTVVIDF VGSVDGVEFD
GGKGDNFSLE LGSGQFIPGF EEQLVGSKAG QTVDVNVTFP EDYQAEDLAG KDAKFVTTIH
EVKTKEVPAL DDELAKDIDD EVETLDELKA KYRKELESAK EIAFDDAVEG AAIELAVANA
EIVELPEEMV HDEVHRAMNE FMGNMQRQGI SPEMYFQLTG TTEEDLHKQY QADADKRVKT
NLVIEAIAAA EGFEATDEEI EKEITDLASE YNMEADQVRG LLSADMLKHD IAMKKAVDVI
TSSATVK
|
|---|
| |