Gene SAG0082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG0082 
SymbolrpsM 
ID1012832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp88470 
End bp88835 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content40% 
IMG OID637315237 
Product30S ribosomal protein S13 
Protein accessionNP_687118 
Protein GI22536267 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.02281e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGTA TTGCTGGAGT TGATATTCCA AATGACAAAC GTGTAGTAAT TTCACTTACT 
TATGTATACG GAATTGGTCT TTCTACATCT AAAAAAATCT TAGCAGCTGC AGGTATTTCT
GAAGATATCC GCGTTAAAGA TTTGACACCA GATCAAGAGG ACGCTATCCG TCGTGAAGTT
GATGCAATCA AAGTTGAAGG TGACCTACGT CGTGAGGTAA ACTTGAATAT TAAACGTTTG
ATGGAAATCG GTTCATACCG TGGAATCCGT CACCGTCGTG GACTTCCTGT CCGTGGACAA
AATACTAAAA ATAACGCTCG CACTCGTAAA GGTAAAGCTG TTGCGATTGC AGGTAAGAAA
AAATAA
 
Protein sequence
MARIAGVDIP NDKRVVISLT YVYGIGLSTS KKILAAAGIS EDIRVKDLTP DQEDAIRREV 
DAIKVEGDLR REVNLNIKRL MEIGSYRGIR HRRGLPVRGQ NTKNNARTRK GKAVAIAGKK
K