Gene SAG0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG0040 
Symbol 
ID1012790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp55017 
End bp55898 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content38% 
IMG OID637315195 
ProductROK family protein 
Protein accessionNP_687076 
Protein GI22536225 
COG category[K] Transcription
[G] Carbohydrate transport and metabolism 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGAA CAGTAGCAAT TGATATTGGC GGTACAATGA TTAAGCATGG CATTGTGGAT 
AATTTAGGTT GTATTGTTGA GGCAAGTGAG CTTGCCACAG AAGCCTACAA AGGTGGTCCA
GGCATTTTAC AAAAAGTTTG TCAAATTATC GATAACTATC TAGCAGAAGG GAGCATTGAT
GGAATTGCTA TCTCATCTGC TGGCATGGTA GATCCAGATG AAGGATGTAT ATTTTACTCT
GGTCCTCAAA TTCCAAACTA TGCTGGGACA CAATTTAAGA AAGTTTTAGA AGACACTTAT
CAAGTACGCA CAGAAATTGA AAATGATGTT AATTGTGCAG GATTAGCTGA AGCTGTCTCA
GGTAGTGCCA AAGATAGTTC AATAGCGCTT TGTCTTACTA TTGGAACAGG TATTGGTGGT
TGTCTGATTA TTGATAAAAC AGTTTTTCAT GGCTTTAGTA ATTCTGCTTG TGAAGTTGGC
TATATGCACC TTTCAGATGG TGATTTTCAA GATTTAGCCT CTACAACTGC ACTGATTGCT
GATGTTGCCA AAGCGCATGG AGATGAAATT AGCCGATGGG ATGGACGTCG TATTTTTCAG
GAGGCTAAAA AAGGCAATGA AAAATGTATT GCAAGTATAG ACCGTATGAT AAACTACCTT
GGCCAAGGAA TCGCTAATAT GGTTTATGTG GTAAATCCTG AAAAAGTTGT TTTAGGTGGT
GGAATCATGG CTCAAAAAGA TTATTTACAA GATAAACTTA GTGAATCTTT GAAACGAAAT
CTTGTGACAA GTCTTGCTGA AAAAACAGCA ATAGTCTTTG CACAACACGA AAACCAAGCT
GGTATGCTAG GAGCTTACTA CCATTTTAAA AACAGGGGGT GA
 
Protein sequence
MTRTVAIDIG GTMIKHGIVD NLGCIVEASE LATEAYKGGP GILQKVCQII DNYLAEGSID 
GIAISSAGMV DPDEGCIFYS GPQIPNYAGT QFKKVLEDTY QVRTEIENDV NCAGLAEAVS
GSAKDSSIAL CLTIGTGIGG CLIIDKTVFH GFSNSACEVG YMHLSDGDFQ DLASTTALIA
DVAKAHGDEI SRWDGRRIFQ EAKKGNEKCI ASIDRMINYL GQGIANMVYV VNPEKVVLGG
GIMAQKDYLQ DKLSESLKRN LVTSLAEKTA IVFAQHENQA GMLGAYYHFK NRG