| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJE1878 |
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| Symbol | |
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| ID | 3230637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni RM1221 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003912 |
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| Strand | - |
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| Start bp | 1756746 |
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| End bp | 1757507 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637293228 |
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| Product | RNA pseudouridylate synthase family protein |
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| Protein accession | YP_179848 |
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| Protein GI | 57236895 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0266462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAATTA ATAAATTTAT ATCCCATAAC ACCCGCTATT CACGCCGTGA AGCCGATGAA
CTTATCAAAC AAGGCTTAGT AAAAATAAAC AACAAAATTG CCCTTTTAAG CGATGAAGTT
AAATTTGATG ATAAAGTTTT TGTTAAAGGT AAAAGAGTAC AAAAAAGAAC GCAATTTAGC
GTGATAATCT ACCATAAACA AAAAGGCGAA ATTGTCAGTA AAAAAGACGA TCGTGGAAGA
AAAACTATAT ATGATACCTT GCCAAGACAA TTTAGTACTT GGCTTAGCGT AGGTAGGCTG
GATTATGCAA GTGAAGGCTT ACTTTTGCTT ACAGATTCTC CTGTGATTGC CGATGCTTTA
ATGCATAGCG ATTTAGAAAG AGAATACTAC CTTAAAGTTA AAGGCACGGT GAGCAAACAA
GTCATCGAAG CCATGCAAAA TGGACTTGAG ATTAAAAATG AAAAAAAAGG CGCACATGCA
AAAACTAAAA TTACCTCTAT GAGTTTTGCT CCTTTTATAG ACTTTGAAAT TTTTGGATCA
AGTGGAGGCT ATACTAAGCT TAGAGTGGTT ATAAATGAAG GTAAAAATAG AGAGCTTAGA
CGCTTTTTTG GACATTTTGA TCTTGAAGTC ATGGATCTTA AGCGTGTTGC TTTTGGGGCT
TTAGATCTTG GTATGTTGAA GGCGGGAAAA CATCGTTATT TAGAAAATGG CGAATATGAA
AAATTAAGAG ATTTTTTAAA ATTTAATGGA ATAAGATATT GA
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| Protein sequence | MRINKFISHN TRYSRREADE LIKQGLVKIN NKIALLSDEV KFDDKVFVKG KRVQKRTQFS
VIIYHKQKGE IVSKKDDRGR KTIYDTLPRQ FSTWLSVGRL DYASEGLLLL TDSPVIADAL
MHSDLEREYY LKVKGTVSKQ VIEAMQNGLE IKNEKKGAHA KTKITSMSFA PFIDFEIFGS
SGGYTKLRVV INEGKNRELR RFFGHFDLEV MDLKRVAFGA LDLGMLKAGK HRYLENGEYE
KLRDFLKFNG IRY
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