| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJE1647 |
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| Symbol | ctsD |
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| ID | 3232275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni RM1221 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003912 |
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| Strand | - |
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| Start bp | 1546459 |
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| End bp | 1547871 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 637292998 |
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| Product | general secretory pathway protein D |
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| Protein accession | YP_179628 |
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| Protein GI | 57238497 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02519] pilus (MSHA type) biogenesis protein MshL |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.948115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAGAT TAATATTAAT TAACATTCTT TTTTGCCATT ATCTTTATGC TTTAGATTGT
CAAAAGCGTC TTTTTGATAT CAGTATTAAT GAAAAATTAA GCATACAAGA AAGTCTTGAT
GAGCTTGCAA AATATTGTTC TTTTAGTATT ATTGTTAAAG ATAAAATTGC CAAAGAAAAA
TTAGAAATAT TGCAAAACTC TGTCAATATT CATCAAATGA GTTTAGACGA AATTTTTAAT
TTTTTTATCA AAGAGCATGA TCTTAGCTAT GATTTTGATG GTAAAATTTT AAGAATTTCA
GGCATTAATA CGAAGATTTT TAAGATAAGT TATATCACTT CTATCAGAGA AGGACAAAGC
ATAACTAAAG CGTCTGTAGA CGCTAAACCA AGGCAAAGTG AATATAGCGG TAGTTTTGAT
GACGCAGAAG ACAATATGAT TAAAAGTATG GAAAAATTTG ATTTTTGGCA AAATATAGAA
AAAGAGATTA TTGTATTATT AAAAAATTCT CATGAAGATT ATGAGGCTAA AACTCCCATT
ATAAATCCCA ATGCAGGTCT TATTATAGTA ACTGGAACAA ATTCTCAGTT AAAAAGTGTG
AAAAATTATT TGCAAAAACT AGAAAATCGT CTTAAAAAAC AAGTTATTAT CGATGTTAGC
ATACTTGCTG TGAGTTTAAA TGAAAACCAT TCTAGTGGGA TTAATTGGCA AAATTTTAAT
ATAGGTTTAA ATTCGCAAGT AAATAATGAA AATTCTTTTA TTCAGTTTCA AAATGGGCAA
GGTTTTGTTA AGAATTTGGG TTTAAGGGTG AATTTAAATT TTGATTCTAT TATTAACTTT
CTTTCTCAAA ATGGAAAAAC TAGCGTGCTT TCTAATCCAA AGCTTATGGC TTTAAATAAC
CAACAAGCCA TTATTTCTGT AGGTGATACT ATAAATTATC AAGTTAAAGA AAGTTCTAAA
GGCACTGAAA ATGGGACTAC TGTTAGTGAA AGTTATAACA ATTATTCTAT TTTTGTAGGC
ATTTTACTCA ATATCTTGCC TGAAATTTCT GATGATGGAA AAATAATGCT CAGGATTAAT
CCAAGCTTAA GTGATTTTAA GTATCCAGAA GATAATAAAC GACAAAAAGA ACCAAGAACT
ATTGCTCCTG ATACCATACA AAAAAAGCTT TCTAGTGTTG TGCAAGTAGA GAATAATCAA
ACTTTAATTT TAGGTGGATT GATTTCTCAC GATAAATCTA ATGAGAAAAA TTCTATCAAT
TTTCTATCAA AAATTCCAAT CCTAGGTTCT TTGTTTAAAG GAGAAGTTTT AAATTCTAAA
GCAACCGAAA TTGTTTTTAT TATCACTCCA AGTATAGTAG ATAGTGTAAA TGCTCCAAGT
CTTAAAGATC TAGGATTTAA GCATTATGAG TAA
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| Protein sequence | MIRLILINIL FCHYLYALDC QKRLFDISIN EKLSIQESLD ELAKYCSFSI IVKDKIAKEK
LEILQNSVNI HQMSLDEIFN FFIKEHDLSY DFDGKILRIS GINTKIFKIS YITSIREGQS
ITKASVDAKP RQSEYSGSFD DAEDNMIKSM EKFDFWQNIE KEIIVLLKNS HEDYEAKTPI
INPNAGLIIV TGTNSQLKSV KNYLQKLENR LKKQVIIDVS ILAVSLNENH SSGINWQNFN
IGLNSQVNNE NSFIQFQNGQ GFVKNLGLRV NLNFDSIINF LSQNGKTSVL SNPKLMALNN
QQAIISVGDT INYQVKESSK GTENGTTVSE SYNNYSIFVG ILLNILPEIS DDGKIMLRIN
PSLSDFKYPE DNKRQKEPRT IAPDTIQKKL SSVVQVENNQ TLILGGLISH DKSNEKNSIN
FLSKIPILGS LFKGEVLNSK ATEIVFIITP SIVDSVNAPS LKDLGFKHYE
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