Gene CJE1404 details

Gene Information

• Locus tag: CJE1404
• Symbol: mnmC
• ID: 3231910
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter jejuni RM1221
• Kingdom: Bacteria
• Replicon accession: NC_003912
• Strand: -
• Start bp: 1319058
• End bp: 1320899
• Gene Length: 1842 bp
• Protein Length: 613 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 637292757
• Product: 5-methylaminomethyl-2-thiouridine methyltransferase
• Protein accession: YP_179390
• Protein GI: 57238140
• COG category: [E] Amino acid transport and metabolism; [S] Function unknown
• COG ID: [COG0665] Glycine/D-amino acid oxidases (deaminating); [COG4121] Uncharacterized conserved protein
• TIGRFAM ID: [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.628111
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAG CTAAGCTAAT TTTTAAGGAT AATACTCCTT TTTCTTTGGA TTTTGATGAT 
TTTTATTTTA ATTCCAAAGA TGGCTTAAAT GAAAGCAAAT TTGTTTACAC TCATTCTTTT 
GAATGGAAAA ATCAAGAAAA TTTTATTATC GCAGAGAGTG GTTTTGGTAT AGGTTTAAAT 
TTTTTTCTTA CTTTGAAACG CCTTTTAGAA ACTACCCCTT CTAAGCGTCC TAAAAAACTT 
TTTTATATTA GCGTAGAAGC TTTTTATATC GAAAAAGAAC AATTAAGAGA AATTTATCAA 
AAACTAGAAT TTTATGAAGA GTTTAAAGAG CTTTTAGAAC AATTTTTAAA ATTTTATCCT 
AAGGCTAAAG AAGGAATTTA TCGTTTTTAT TTTGAAGATT GTTTTTTAGA TCTTGTTTTT 
GAAGATATAG CTGTTTTAAA AGAATTGGAT TTTAAAGCTG ATGTTTGGTA TTTAGATGGA 
TTTTCTCCAA ATAAAAACTT GCAAATGTTT GATGAAAATT TAATCTTTGA AGTGGCAAGA 
CTTTCTAAAA AAAATACACA AATTTGCACC TTTTCTTCGG CAAGTTTTTT GCAAAAAAAT 
TTAAAAAAAT ATGGTTTTAG AGTAGAAAAA ACCAAAGGTT TTAGAAAAAG AGAAATGATT 
AAAGCTTATT TGGAAAATGA GCTTGAGTTT AAAGACAAAG AAGCGTATTT TTCAAGAACA 
TTTTCATCTT TAAAAAATAA AAAAGTAGCT ATTATTGGTG CGGGTATATC AAGCGCTGTT 
TTAGCTTATG AACTTAGTTT AAGGGGTTTT GAGATAGATG TTTTTGAAAA ATATTTAGAA 
TTAGGCAAGG GTGCAAGTGG AAATGAAAGT GGAATTTTAA GCTCTTTAAT CTTAAAACCT 
AAGGTAAATT TAGGGGAGTT TTCAGAGCTT TCTTTTATAG AAGCAAGCCG TTTTTATAGA 
CAAATTTTAG ATTTAGAATT TAAGGGTGTG GTGGAGTTTG CACATAATGA TTTGATGCAA 
GAAAGATTTG ACACACAAAG AGAAAATGTT TTGTTTAAAA TTTCAAAAAA TCAAGCTTTT 
TTAGAAGAGG GTGGAGTGAT TTTTCCAAAA AATTTGGTTA AAAATCTTTT TGAAAAAAGT 
AAAGCTTGTA TATATTTTAA TCATGAATTT CAAGCTTATA AATTTAAAAA TGAGTGTTTT 
ACTTTAAAAT TTAAAAATGA TATTGTTAAA AGTGATTATG CGGTTTTGAT TTATGCTATG 
GGTGCAGATA CAAAAGATTT TGTTTTTTAT GATGAGATGA AATTAAGCAA AGTAAGAGGT 
CAAGTTACAC ATCTAAAACC TTTTTTAGAT ACCCCATTTC CTTTATCTTC TAAGGCTTAT 
ATTTGCCCTG TAAAAGATGA TTTGCAAGTA ATTGGAGCAA GTTATGATAG GCTTAATGCA 
AGTTTAGAAT CAAAAGAAGA AGATGATAAA CAAAATATAG AAAATATAGC CGAATTTATA 
GATAAAAATA CAAAATTAGA AATCATAGGT TCTAAGGTAG GCTTTAGATC TTATTCGAGT 
GATCGCTTTA TGATAGTTGG AAATGCCTAT GATGAAGTGT TTTATAAAGA AGAATATAAA 
GCTTTATTAT GGACAAAAAA CAAGGAGCAA AAACCAGCTA AAATGTCTTG TAATTTGTAT 
TTTAATTTTG CTCATGGATC AAGGGGTTTT AGCACAAGTG TTTTAGCGGC AAGGTATTTG 
TGTGCATTGA TAAATAATGA ACCCTTGTGT TTAGAAAAAA AATACATCCA CGCTATTCAC 
CCTGCAAGAT TTTTGATTCG CAAACTCAAA AAAGGCTTAT GA 

 

Protein sequence

MKKAKLIFKD NTPFSLDFDD FYFNSKDGLN ESKFVYTHSF EWKNQENFII AESGFGIGLN 
FFLTLKRLLE TTPSKRPKKL FYISVEAFYI EKEQLREIYQ KLEFYEEFKE LLEQFLKFYP 
KAKEGIYRFY FEDCFLDLVF EDIAVLKELD FKADVWYLDG FSPNKNLQMF DENLIFEVAR 
LSKKNTQICT FSSASFLQKN LKKYGFRVEK TKGFRKREMI KAYLENELEF KDKEAYFSRT 
FSSLKNKKVA IIGAGISSAV LAYELSLRGF EIDVFEKYLE LGKGASGNES GILSSLILKP 
KVNLGEFSEL SFIEASRFYR QILDLEFKGV VEFAHNDLMQ ERFDTQRENV LFKISKNQAF 
LEEGGVIFPK NLVKNLFEKS KACIYFNHEF QAYKFKNECF TLKFKNDIVK SDYAVLIYAM 
GADTKDFVFY DEMKLSKVRG QVTHLKPFLD TPFPLSSKAY ICPVKDDLQV IGASYDRLNA 
SLESKEEDDK QNIENIAEFI DKNTKLEIIG SKVGFRSYSS DRFMIVGNAY DEVFYKEEYK 
ALLWTKNKEQ KPAKMSCNLY FNFAHGSRGF STSVLAARYL CALINNEPLC LEKKYIHAIH 
PARFLIRKLK KGL