Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE1403 |
Symbol | hydA |
ID | 3231909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | - |
Start bp | 1317798 |
End bp | 1318880 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637292756 |
Product | quinone-reactive Ni/Fe-hydrogenase, small subunit |
Protein accession | YP_179389 |
Protein GI | 57238139 |
COG category | [C] Energy production and conversion |
COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAGACA ATGATAGTAT TACAAAAGCA TTAGAAAAGT CAGGTTTTTC TAGAAGGGAT TTTATGAAAT GGGCAGGTGC TATGACGGCA TTTTTGGCTT TGCCAGCGAG TTTTACTCCT ATGGTGGCAA AAGCTGCTGA GCTTGCTGAT AGGCTTCCTG TTGTGTGGCT TCATATGGCT GAGTGTACAG GCTGTAGTGA GAGTTTGTTA AGAAGTGATA CTCCAACGAT TGATAGTTTG ATTTTTGATT ATATTTCTTT AGAATATCAC GAAACAGTGA TGGCTGCAGC AGGTTGGCAA GCTGAAGAAA ATTTAGAAAG TGCCATTCAA AAGCATAAAA ATAAATACAT TTTAATGGTT GAAGGTGGTA TCCCTATGGA TGATACGGAG CATTTTTTAA CCATAGGTGC ACATGGAAAA ACAGGCTATG AGCTTTCAAA AATGGCAAGT GAAAATGCTT TGGCGATTTT TGCTATAGGA ACCTGTTCTA GCTTTGGAGG AATTCAAGCC GCAAGACCAA ATCCTAGCAA CGCGCAGCCT TTAAGCAAAG TAACAAGTAA AACTGTGATC AATGTTCCAG GCTGTCCTCC AAGTGAAAAA AATATAGTGG GTAATGTACT TCATTATTTA TTATTTGGTG AGTTACCAGC ACTTGATGTG TATAATAGAC CAAAATGGGC TTATGGTTTA AGAATTCATG ATCTTTGTGA AAGACGCGGA CATTTTGATG CGGGTGAATT TGTACATGCT TTTGGAGATG AAGGAGCAAA ACAAGGTTTT TGTCTTTATA AAGTAGGTTG TAAAGGACCT TATACTTTTA ATAACTGCTC AAGAGAGAGA TTTAACCAGC ACACTTCTTG GCCTATTCAA GCAGGGCATG GTTGTATAGG TTGTTCTGAG CCTAATTTTT GGGATACTAT GGGACCTTTT GAAGAGCCTA TGGCTAGTCG TAAATTTGAT ACTGTTTTTG GTTTGGGTGC GGATAGTGTT TCAGATAAAA TCGGTATAGG TGTGCTTACA CTCACAGGCG TTGCTATAGC AGCACACGCA GTTATATCTT CCATGCAAAA AGATAAGGAA TAA
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Protein sequence | MKDNDSITKA LEKSGFSRRD FMKWAGAMTA FLALPASFTP MVAKAAELAD RLPVVWLHMA ECTGCSESLL RSDTPTIDSL IFDYISLEYH ETVMAAAGWQ AEENLESAIQ KHKNKYILMV EGGIPMDDTE HFLTIGAHGK TGYELSKMAS ENALAIFAIG TCSSFGGIQA ARPNPSNAQP LSKVTSKTVI NVPGCPPSEK NIVGNVLHYL LFGELPALDV YNRPKWAYGL RIHDLCERRG HFDAGEFVHA FGDEGAKQGF CLYKVGCKGP YTFNNCSRER FNQHTSWPIQ AGHGCIGCSE PNFWDTMGPF EEPMASRKFD TVFGLGADSV SDKIGIGVLT LTGVAIAAHA VISSMQKDKE
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