| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJE1347 |
|---|
| Symbol | glcD |
|---|
| ID | 3231853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni RM1221 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003912 |
|---|
| Strand | - |
|---|
| Start bp | 1262412 |
|---|
| End bp | 1263794 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637292700 |
|---|
| Product | glycolate oxidase, subunit GlcD |
|---|
| Protein accession | YP_179334 |
|---|
| Protein GI | 57238084 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG AATTTGAACA ATATTTTAAA CGATTTTTAG GAGAAGAAAA CGCTTATTTT
GATGAAATTC ACAAAAGAGC TTATAGCTAT GATGCGACAA AAAAACATTA TTTACCTGAT
GGGGTTCTTT TTCCAAGAAA TGAAGAAGAT ATTGCTCAAA TTTTAAAATT TTGCAATGAA
AATAATATCA TAGTCATACC TCGAGGCTCA GGATCTGGTT TTACAGGAGG AGCTTTAGCT
GTTAATGGCG GGGTGGTGCT TGCTTTTGAA AAGCATATGA ATAAAATTTT AGAAATTGAT
CTTGAAAATT TAGTGGCTGT TGTGCAACCT GGGGTTATTA ATATACATTT ACAAAAAGAA
GTGGCTAAAT ATGGACTTTT TTACCCACCT GACCCTGCTA GCATGGAGTA TTCAAGCTTA
GGGGGTAATG TAAGCGAAAA TGCTGGGGGA ATGAGAGCTG CAAAATATGG CATTACAAAA
GATTATGTGA TGGCTTTAAG GGCTGTTTTG CCTAGCGGAG AAATCATTCG TGCAGGGAAA
CGCACTATTA AAGATGTAGC AGGTTATAAT TTGGCAGGAA TTTTAATCGC TAGTGAAGGT
TCTTTGGCAG TTTTAAGTGA GCTTACTTTA AAATTAATAC CTTTGCCTAA ATTTAAAAAA
ACTGCTTTTG CTATTTTTCC AAGTGTAAAA AGTGCTATGA ATGCGGTTTA CAAAAGTCTT
GCTAGCGGTG TAAGTCCTGT ATCTATGGAA TTTTTAGACA ATCTTAGCAT TAGAGCAGTT
GAGAGCAAAT TTAATAAAGG TTTGCCTATA GAAGCTGGAG CTATTTTGAT TGCTGATGTG
GATGGTAATG TTAAAGAGGC TATTGATGAG GATTTAAGAA ATTTAGAATA TTATTTTTTA
GAAGCTGGCG CTAGCGAATT TAAAATAGCA AAAGATGAAC AAGAAACCGC AGATATTTGG
TTTGCTAGAA GAAATTGTTC TCAAAGCATT GCCATGTATG GAACTTTAAA ACTTAATGAA
GATATTACAG TTCCGCGTTC TAAACTACCT ACTTTACTTG AAGGTATAGA TGAGATTTCT
AAAAAATATG GTTTTAAAAT TCCTTGTTTT GGACATACAG GGGATGGAAA TGTGCATACT
AATGTTATGG TTCCTGATAA AAATGATAAA GAGCAGGTGA AAAAAGGCTA TGAAGCTGTG
GAAGAGATTT TTAAATTAAC AGTGAAACTT GGAGGAACTT TAAGCGGAGA GCATGGTATC
GGACTCTCTA AGGCACCTTT TATGAATTTA GCTTTTTCTG AAGCCGAAAT GAATTTAATG
AGAAATATTA AAAAAGCTTT TGATCCAAAT AATATACTAA ATCCTTTTAA AATGGGACTT
TAG
|
|---|
| Protein sequence | MKKEFEQYFK RFLGEENAYF DEIHKRAYSY DATKKHYLPD GVLFPRNEED IAQILKFCNE
NNIIVIPRGS GSGFTGGALA VNGGVVLAFE KHMNKILEID LENLVAVVQP GVINIHLQKE
VAKYGLFYPP DPASMEYSSL GGNVSENAGG MRAAKYGITK DYVMALRAVL PSGEIIRAGK
RTIKDVAGYN LAGILIASEG SLAVLSELTL KLIPLPKFKK TAFAIFPSVK SAMNAVYKSL
ASGVSPVSME FLDNLSIRAV ESKFNKGLPI EAGAILIADV DGNVKEAIDE DLRNLEYYFL
EAGASEFKIA KDEQETADIW FARRNCSQSI AMYGTLKLNE DITVPRSKLP TLLEGIDEIS
KKYGFKIPCF GHTGDGNVHT NVMVPDKNDK EQVKKGYEAV EEIFKLTVKL GGTLSGEHGI
GLSKAPFMNL AFSEAEMNLM RNIKKAFDPN NILNPFKMGL
|
|---|
| |