| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJE0897 |
|---|
| Symbol | dapA |
|---|
| ID | 3231410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni RM1221 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003912 |
|---|
| Strand | + |
|---|
| Start bp | 837165 |
|---|
| End bp | 838061 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637292254 |
|---|
| Product | dihydrodipicolinate synthase |
|---|
| Protein accession | YP_178899 |
|---|
| Protein GI | 57237651 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAA ATATTATTAT TGGGGCAATG ACGGCCCTTA TTACACCGTT TAAAAATGGA
AAAGTTGATG AGCAAAGTTA TGCAAGATTG ATTAAAAGGC AAATAGAAAA TGGCATCGAT
GCAGTAGTTC CAGTAGGAAC AACAGGAGAA AGTGCAACTT TAACCCATGA AGAACATAGA
ACTTGCATAG AAATAGCCGT TGAGACTTGT AAAGGAACTA AAGTTAAGGT TTTAGCAGGT
GCGGGAAGTA ATGCAACTCA TGAGGCAGTG GGTTTGGCTA AATTTGCTAA AGAGCATGGT
GCTGATGGGA TTTTAAGTGT GGTACCGTAT TATAATAAAC CTACGCAACA AGGACTTTAC
GAGCATTATA AGGCTATTGC GCAAAGTGTA GATATTCCTG TGCTTTTATA TAATGTTCCA
GGAAGAACAG GTTGTGAAAT TTCAACGGAT ACTATTATCA AGCTTTTTAG AGATTGTGAA
AATATTTATG GAGTAAAAGA AGCGAGTGGA AATATCGATA AGTGTGTGGA TTTGCTTGCA
CACGAACCTA GAATGATGCT TATTTCAGGG GAAGATGCGA TCAATTATCC TATACTTTCA
AATGGTGGAA AGGGAGTGAT TTCAGTAACT TCAAATTTAT TACCCGATAT GATTAGCGCT
TTAACTCATT TTGCTTTAGA TGAAAATTAT AAAGAAGCTA AAAAAATCAA TGATGAGCTT
TATAATATCA ATAAAATTTT ATTTTGCGAA AGTAATCCTA TTCCTATTAA AACGGCTATG
TATTTAGCTG GATTGATAGA AAGTTTGGAA TTTAGACTTC CTCTTTGTTC TCCAAGTAAG
GAAAATTTTG CTAAAATTGA AGAAGTGATG AAAAAATATA AGATCAAAGG ATTTTAA
|
|---|
| Protein sequence | MDKNIIIGAM TALITPFKNG KVDEQSYARL IKRQIENGID AVVPVGTTGE SATLTHEEHR
TCIEIAVETC KGTKVKVLAG AGSNATHEAV GLAKFAKEHG ADGILSVVPY YNKPTQQGLY
EHYKAIAQSV DIPVLLYNVP GRTGCEISTD TIIKLFRDCE NIYGVKEASG NIDKCVDLLA
HEPRMMLISG EDAINYPILS NGGKGVISVT SNLLPDMISA LTHFALDENY KEAKKINDEL
YNINKILFCE SNPIPIKTAM YLAGLIESLE FRLPLCSPSK ENFAKIEEVM KKYKIKGF
|
|---|
| |