Gene CJE0710 details

Gene Information

• Locus tag: CJE0710
• ID: 3231968
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter jejuni RM1221
• Kingdom: Bacteria
• Replicon accession: NC_003912
• Strand: +
• Start bp: 641988
• End bp: 643913
• Gene Length: 1926 bp
• Protein Length: 641 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 637292073
• Product: macrolide-specific efflux protein macB
• Protein accession: YP_178722
• Protein GI: 57238197
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component
• TIGRFAM ID: [TIGR03608] putative bacteriocin export ABC transporter, lactococcin 972 group

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTTTTC TTAAAAATAT TTGCAAAAAT ATAGGCGAAA ATGCCATTTT AAAAAATGTA 
AGTTTAAGTA TAGAAAAAGG TGAATTTGTT GCTATTATAG GACAAAGTGG AAGTGGTAAA 
ACTTCACTTT TGAATATCAT AGGAACATTA GATACACCAA GTAGTGGAAC TTATGTTTTT 
GATGAGTATG AAGTCACTAA ACTTAATAAT GATGAAAAAG CAAGATTAAG GCGTGAAAAA 
ATAGGCTTTA TATTTCAAAG ATACAATCTT TTAAGCTTGC TGAGTGCTAA AGAAAATGTT 
TCTTTACCTG CAGTTTATGC GGGAAAAAAT TTACAAGAAA GAAGTCAAAA TGCTAAAAAA 
CTCTTAAATG ATTTAGAATT AGCTCACAAG TTAGATTCTA AGCCAAACGA ATTAAGCGGA 
GGGCAGCAAC AACGCGTTTC TATAGCAAGA GCTTTAATCA ATGGCGGAGA GCTTATTTTG 
GCTGATGAGC CAACGGGAGC TTTGGATAGT AAAAGCGGTA TTATGGTGCT TGAAATTTTA 
CAAAAACTTA ACGAGCAAGG TCATACTATA GTCTTAGTAA CTCACGATCC AAAAATTGCA 
GCACAAGCTA AAAGGGTTAT AGAGATTAAA GATGGAGAAA TTTTAAGCGA TACTAAAAAG 
GAAAAAGCTC AAGAAAAACT TATTTTAAAA ACAATGCCCA AAGAGAAAAA AACACTTACT 
TTGCTTAAAA ATCAAGCCTT TGAATGTTTT AAGATAGCTT ATTCTTCCAT ACTTGCACAC 
AAACTTCGTT CTATTTTAAC TATGCTTGGA ATCATCATAG GTATTGCTTC TGTAGTTTGT 
GTTGTAGCTT TAGGATTAGG CTCTCAAGCT AAAGTGCTTG AGTCTATTGC AAGACTTGGG 
ACAAATACTA TTGAAATTCG CCCTGGAAAA GGATTTGGGG ATTTGCGTTC GGGTAAAACA 
AGGCTTAATT TTAGTGATTT AGAAACATTA AGATCTTTAG AATATTTAGA AGCAGTTGAT 
GCTCATTCAA ATACTTCAGG AGTGGCAACT TATACCAATA TTTCTTTAAG CGCAAGAGCT 
GAAGGGGTAG GGGTAAATAA TTTTGCTATA GAAGGTTTAA GGATAGATGC GGGAAGAATT 
TTAAATAATG ATGATGTAAA AAATAGTACC AATGTTGCTG TATTGGATTT TAATGCTAAA 
AAAAATCTTT TTCCTGATGA AAAAAGTGAA AATATTTTAG GTCGTGTGGT GCTTTTTAAT 
TCTCAATCTT TTAAGATTAT AGGAGTTTTG CAAAAAGATA CAGACAAGCC TATAGAAGAT 
AATGTAGTAC GTCTTTATAT ACCCTATACA ACACTGATGA ATAAGCTTAC AGGAGATAGA 
AATTTGCGTG AAATCATAGT TAAGGTTAAA GATGATGTGA GTTCAACTTT GGCTGAAAAT 
GCTATTATAA GAATTTTAGA AATTAAACGC GGACAAAAGG ATTTTTTTAC TTTTAATTCT 
GACACTTTTA AGCAAGCTAT TACAGCAAAT AAACGCACTA CAACCATACT TACCGCTTGT 
GTGGCTGTGA TTGCTTTGAT TGTTGGGGGT ATAGGAGTGA TGAATATCAT GCTTGTTTCT 
GTAAGTGAAA GAACAAGAGA AATAGGCATA CGCATGGCTA TAGGAGCTAG AAGAGAAGAT 
ATTATGATGC AGTTTTTAAT CGAAGCGGTT ATGATTTGTA CTATAGGGGC GATTTTAGGT 
GTGATTTTAT CGATTTTTGT TATTTTTGCT TTTAATACTT TAAGTACGGA TTTTCCTATG 
ATTTTAAATG CCTATTCTGT GCTTTTGGGA CTTTTAAGTT CTATGTTTAT CGGTGTGGTT 
TTTGGTTTTT TCCCTGCAAG AAATGCAGCA AATTTAAATC CTATTAGTGC ATTATCAAAG 
GAATAA 

 

Protein sequence

MIFLKNICKN IGENAILKNV SLSIEKGEFV AIIGQSGSGK TSLLNIIGTL DTPSSGTYVF 
DEYEVTKLNN DEKARLRREK IGFIFQRYNL LSLLSAKENV SLPAVYAGKN LQERSQNAKK 
LLNDLELAHK LDSKPNELSG GQQQRVSIAR ALINGGELIL ADEPTGALDS KSGIMVLEIL 
QKLNEQGHTI VLVTHDPKIA AQAKRVIEIK DGEILSDTKK EKAQEKLILK TMPKEKKTLT 
LLKNQAFECF KIAYSSILAH KLRSILTMLG IIIGIASVVC VVALGLGSQA KVLESIARLG 
TNTIEIRPGK GFGDLRSGKT RLNFSDLETL RSLEYLEAVD AHSNTSGVAT YTNISLSARA 
EGVGVNNFAI EGLRIDAGRI LNNDDVKNST NVAVLDFNAK KNLFPDEKSE NILGRVVLFN 
SQSFKIIGVL QKDTDKPIED NVVRLYIPYT TLMNKLTGDR NLREIIVKVK DDVSSTLAEN 
AIIRILEIKR GQKDFFTFNS DTFKQAITAN KRTTTILTAC VAVIALIVGG IGVMNIMLVS 
VSERTREIGI RMAIGARRED IMMQFLIEAV MICTIGAILG VILSIFVIFA FNTLSTDFPM 
ILNAYSVLLG LLSSMFIGVV FGFFPARNAA NLNPISALSK E