Gene CJE0709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCJE0709 
Symbol 
ID3231969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni RM1221 
KingdomBacteria 
Replicon accessionNC_003912 
Strand
Start bp640816 
End bp641988 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content32% 
IMG OID637292072 
Productmacrolide-specific efflux protein macA 
Protein accessionYP_178721 
Protein GI57238198 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA AGATTGTTTT AATCATTTTA ATTGCAATAC TTGGAAGTGT TGGGGCTTAT 
TTTATTTTTT TTAATAATGA TGAAAAAATC AGCTATTTAA CTCAAAAAAT ACAAAAAAAA
GATATATCTC AAACCATAGA GGCAGTAGGA AAGGTATATG CCAAAGATCA AGTCGATGTG
GGTGCTCAAG TTAGTGGACA AATTATAAAA CTTTATGTTG ATGTGGGAAC TCATGTAAAG
CAAGGTGATT TGATCGCTCA AATTGATAAA GATAAACAAC AAAACGATTT AGATATTACA
AAAGCTCAGC TTGAAAGTGC TAAGGCTAAT TTAGAGAGTA AAAAAGTTGC CCTTGAGATT
GCGAATAAGC AATATCAAAG AGAGCAAAAA CTTTATGCAG CTAAAGCAAG TTCTCTTGAA
AATTTAGAAA CTCAAAAAAA TAATTATTAT ACTTTAAAAG CCAATGTTGC AGAGCTTAAT
GCTCAAGTAG TTCAGCTTGA AATCACTCTT AAAAATGCAC AAAAAGATTT AGGTTATACA
ACCATTACTG CTCCTATGGA TGGTGTTGTG ATTAATGTAG CTGTAGATGA AGGACAAACA
GTTAATGCTA ATCAAAACAC TCCTACTATA GTCCGTATAG CTAATTTAGA CGAAATGGAA
GTAAGAATGG AAATAGCAGA GGCTGATGTG AGTAAGATAA AAGTAGGAAC AGAGCTTGAT
TTTTCTTTGC TTAATGATCC TCAAAAAACT TATCATGCTA AGATTGCAAG TATAGATCCA
GCTGATACTG AAGTGAGTGA TTCTAGTACA AGCTCAAGCT CATCAAGTTC GAGTTCTTCA
AGCTCAAGCT CATCAAATGC TATTTATTAT TACGCAAAAT TTTATGTAGC CAATAAAGAT
GATTTTTTGC GTATTGGTAT GAGTATACAA AATGAAATTG TCGTAGCAAG TGCAAAGGCT
GTTTTAGCAG TGCCAACTTA TGCAATTAAA AGCGATCCAA AAGGCTATTA TGTTGAAATT
TTGGAAAATC AAAAAGCTGT TAAAAAATAT GTCAAACTTG GCATTAAAGA TTCTATCAAT
ACTCAAATTT TAGAAGGTGT AAATGAAGAT GAAGAATTGA TAGTAAGCTC AAGTGCTGAT
GGTTTAGCTC CTAAAATGAA GTTGAGATTT TAA
 
Protein sequence
MKKKIVLIIL IAILGSVGAY FIFFNNDEKI SYLTQKIQKK DISQTIEAVG KVYAKDQVDV 
GAQVSGQIIK LYVDVGTHVK QGDLIAQIDK DKQQNDLDIT KAQLESAKAN LESKKVALEI
ANKQYQREQK LYAAKASSLE NLETQKNNYY TLKANVAELN AQVVQLEITL KNAQKDLGYT
TITAPMDGVV INVAVDEGQT VNANQNTPTI VRIANLDEME VRMEIAEADV SKIKVGTELD
FSLLNDPQKT YHAKIASIDP ADTEVSDSST SSSSSSSSSS SSSSSNAIYY YAKFYVANKD
DFLRIGMSIQ NEIVVASAKA VLAVPTYAIK SDPKGYYVEI LENQKAVKKY VKLGIKDSIN
TQILEGVNED EELIVSSSAD GLAPKMKLRF