Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE0359 |
Symbol | lysA |
ID | 3231121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | + |
Start bp | 320117 |
End bp | 321325 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637291717 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_178378 |
Protein GI | 57237365 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.604138 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTATA AACAATTAAA GCAAGAATTT AATACTCCTT TTTATATTTA CAATTTTGAT TTCATAAAAG AGTGTTTTTT AAATCTCAAA GAGGCTTTTA AGGCTAGAAA ATCTCAAATT TTTTACGCTG TAAAAGCCAA TTCAAATTTA AGTTTGTTGC AAATGCTTGC AAATTTAGAT AGTGGATTTG ATTGTGTAAG TATAGGCGAG GTAAAGCGTG CCTTAAAAGC AGGAGCAAAA GCTTATAAGA TTATTTTTAG TGGAGTAGGA AAAACCAAAG AAGAGTTAAG ACAAGCTTTA GAATATGATA TTTTATATAT TAACCTTGAA AGCGAAGCTG AAATGATGCT TTTAGAAAGT GTGGCTAAAG AACTTAATCT AAAGGCAAGA ATCAGTATTC GTGTTAATCC AAATGTTGAT GCAAAAACTC ATCCTTATAT TTCTACAGGA TTAAATGAAA ATAAATTTGG TGTCGAAATT GATATAGCAA GAAAAATGTA TCTTTATGCA AAAAATTCAT CTTTTTTAGA GCCCGTTGGA GTGCATTTTC ATATAGGTTC GCAACTTTTA GATATTTCTC CCATTCATGA AGCAGCAGGC ATCGTTGCAA AACTTGTAAG AGAGTTAAAA GCCTTGCAAA TCGATCTTAA ATTTTTTGAT ATAGGCGGTG GTTTGGGTGT GGCTTATGAA AAAGATGAGT GTGAATCTGA TCTTTATGAT TATGCACAAG GTATATTAGC ACAACTTCAT GGGCTTGATT TAACTATAGG AATGGAGCCT GGAAGGTATT TAGTTGCTAA AAGTGGAGAA TTTGTTTGTT CAGTGCTTTA TGAAAAACAA AATAAAACCA AGCGTTTTGT TGTAGTAGAT GGAGCGATGA ATGATCTTAT ACGCCCAAGT TTATACGAGG CTTATCATGA AATAATCTTA CCTTATAATC AAGCCCAAGA GAGTTTATGT GATGTTGTAG GTGGAATTTG TGAGAGTGGA GACTTTTTTG CTAAAGCAAG GTCTTTACCT AGCACTCAAA GTGGCGATAT AATGGTTATT AAAAATACTG GAGCTTATGG TTTTAGCATG AGTAGTAATT ACAATACTCG TAATAAAGTT TGCGAATTAG CTCTTGAAGA AGGACAGGTA AGATTGATCC GTCAAAGAGA AAATTTTGAA AATCAAATCG CTTTAGAAGA GAAATTTTTA AAGGCTTAA
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Protein sequence | MDYKQLKQEF NTPFYIYNFD FIKECFLNLK EAFKARKSQI FYAVKANSNL SLLQMLANLD SGFDCVSIGE VKRALKAGAK AYKIIFSGVG KTKEELRQAL EYDILYINLE SEAEMMLLES VAKELNLKAR ISIRVNPNVD AKTHPYISTG LNENKFGVEI DIARKMYLYA KNSSFLEPVG VHFHIGSQLL DISPIHEAAG IVAKLVRELK ALQIDLKFFD IGGGLGVAYE KDECESDLYD YAQGILAQLH GLDLTIGMEP GRYLVAKSGE FVCSVLYEKQ NKTKRFVVVD GAMNDLIRPS LYEAYHEIIL PYNQAQESLC DVVGGICESG DFFAKARSLP STQSGDIMVI KNTGAYGFSM SSNYNTRNKV CELALEEGQV RLIRQRENFE NQIALEEKFL KA
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