| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJE0300 |
|---|
| Symbol | |
|---|
| ID | 3231062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni RM1221 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003912 |
|---|
| Strand | - |
|---|
| Start bp | 264966 |
|---|
| End bp | 266276 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637291659 |
|---|
| Product | major facilitator superfamily protein |
|---|
| Protein accession | YP_178320 |
|---|
| Protein GI | 57237307 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAA CCCTTAACCA AAAAGATATA AAAGTTTTAG GACTTTCATC ATTAGGTGGA
ACTTTAGAAT TTTATGATTT TATTATTTTT GTATTTTTTG CAAATTATAT TTCAACAAAC
TTTTTTCCAA AAGATTTAAG TAGTTTTTGG CAAATGTTTA ATACTTATGG AATATTTGCA
GCTGGATATT TAGCGCGTCC CTTAGGGGGT GTGATACTGG CACATTTTGG AGATAAATTT
GGACGCAAAA GAATGTTTAT GATTAGTATT TTGTTAATGG TTATTCCAAC TTTTACTCTA
GCTTTTATTC CAAATTATGA AAGTATAGGT TTTCTTTGTA TTGTGCTTTT AGTTTTTATA
CGCATTTGTC AAGGTATAGC TATAGGCGGG GAACTTCCTG GAGCTTGGGT TTTTGTATAC
GAACACGCAC CACAAGGTCA AAAAAGAACT TATTTGGGAA TTTTAACCGC TTCGGTTGTA
GGTGGAATTT TATTAGGTAG TTTAGTTTTT TTAATTATGA ATAAAATTTA TACCCAAGAA
GAACTTCATG AATGGGCTTG GAGAATTCCA TTCTTTTTAG GTGGAATTTT TGGGATTATT
TCTGCTTATT TGAGAAAATT TTTAAGAGAA ACTCCTGTTT TTGAACAAAT GAAAAAAGAC
AAGGCTTTAG AAAAATTTCC TTTAAAAGAA GTGTTTAAAA AAGCTAAAAT GGGAATTGTT
CTTTCTATGA TGATTACTTG GGTTTTGACA GGTTGTATTG TTGTAATGAT TTTGCTTATG
CCTAGTTATA TGGCAAAAAT ACTTCAAATT AATACTTCTA TACAAACCTA TCTTCAAATA
GGTGGAATTT TGCTTATTTG CCTAGGGTGT ATTATAAGTG GAATTTTAGC GGATAAAATA
AGCGTTATTA AATCTTGTGT ATTTTTTAGT GTTTTTTTTG GAATTGCGAG CTTGCTTTAT
TTTAATACTT TATATAGACA AAATGCTGAT TTTAACCTAG TAGCTTGCTT ATATTTACTT
GTATGTTTTT TTAGCGGGGT GATGAATTTT TGCCCTTTAA TAATGAGTGA AGTATTTGAT
GCAAAAATTA AATTTTCAGG ACTTTCTTTT TCATATAATA TTGCTTATGC TATAGCTGGA
GGTTTAACTC CGCAACTTGC TTTTTTCTTG CATAGTTTTG CCTTAAATAA TTTAAGTAAT
TTTTGGCGTT TTTCTTTGGG ACTTTATGTT TTCTTTTTGG CTATTATAGC TTTGCTATGT
ACATTTATTT TTTCTTATCT TAATAATACC CAACGCACAT ACTCTCAGTG A
|
|---|
| Protein sequence | MNKTLNQKDI KVLGLSSLGG TLEFYDFIIF VFFANYISTN FFPKDLSSFW QMFNTYGIFA
AGYLARPLGG VILAHFGDKF GRKRMFMISI LLMVIPTFTL AFIPNYESIG FLCIVLLVFI
RICQGIAIGG ELPGAWVFVY EHAPQGQKRT YLGILTASVV GGILLGSLVF LIMNKIYTQE
ELHEWAWRIP FFLGGIFGII SAYLRKFLRE TPVFEQMKKD KALEKFPLKE VFKKAKMGIV
LSMMITWVLT GCIVVMILLM PSYMAKILQI NTSIQTYLQI GGILLICLGC IISGILADKI
SVIKSCVFFS VFFGIASLLY FNTLYRQNAD FNLVACLYLL VCFFSGVMNF CPLIMSEVFD
AKIKFSGLSF SYNIAYAIAG GLTPQLAFFL HSFALNNLSN FWRFSLGLYV FFLAIIALLC
TFIFSYLNNT QRTYSQ
|
|---|
| |