Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE0176 |
Symbol | |
ID | 3230939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | + |
Start bp | 177400 |
End bp | 178686 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637291539 |
Product | transporter, putative |
Protein accession | YP_178200 |
Protein GI | 57237188 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTGTTG TTGCACTTGC TCTAGTGTTT TTAAATGGTT TTTTTGTTTT GTCTGAATTT AGTATTGTTA AAGTACGTCG TTCCAAGCTT GAAGAGATGG TAAAAGAAAA AAAAGCTGGT GCCAAGAAAG CTTTGGAGGT TACTTCAAGA CTTGATACTT ATCTTAGTGC TTGTCAATTA GGAATCACTT TAAGTTCTCT AGCTCTTGGT TGGATAGGTG AGCCTGCTAT TGCAAAAATG CTAGAAATTC CGCTTATTAA TCTTGGTTTT AGCACTGTTA TTATCCATAC TATGGCTTTC ATTATTGCTT TTAGCATTAT TACTCTTTTA CATGTGGTTT TAGGAGAACT TGTGCCAAAA AGTATAGCTA TTGCAGTTGC AGATAAAGCG GTTTTATTTA TAGCTAGACC GCTTCATTGG TTTTGGATGC TCTTTTTGCC TTGTATTAAA ATTTTCGATT TTTTAGCAGC TATAAGTTTG AAACTTTTTG GAATAAAACC TGCTAAAGAA AGCGAGCTAA CTCATAGCGA AGAAGAAATT AAAATCATAG CAAGTGAGAG TCAAAAAGGT GGAGTTTTAG ATGAATTTGA AACAGAGATC ATACGCAATG CTGTTGATTT TTCAGATACT GTTGCTAAAG AGATTATGAC TCCTAGAAAA GATATGATTT GTCTAAATAA ACAAAAAAGT TACGAAGAAA ATATGCAAAT CATTTGTGAG CATAAACATA CTCGCTTTCC TTATATTGAT GGTTCTAAAG ATACTATTTT AGGTATGATA CACATACGAG ATATAATACA AAATGAATTA AACCATAAAA GTCAAAATTT AGATACTTTT GTTAAACCTT TGATTTTGGT TCCTGAAAAT ATCAGCATTT CAAAAGTACT TGTAATGATG AATAAAGAAC TCTCTCATAC TGCATTAGTA GTTGATGAGT ATGGTGGAAC TGCTGGAATT TTAACCATGG AAGATATCAT GGAAGAAATT ATTGGCGAAA TTAAAAGCGA GCATGAAGAA GACAGCTATA AAAAACTTGC TGAAAATATC TATGAATTTC AAGGACGATG CGATATAGAA ACTGTTGAAG AAATGCTTGT AATAAACTAT GATGAGGATT TAGAACAAGT TACTATAGGT GGTTATGTAT TTAATCTTTT AGGACGCTTG CCTATGGTAG GAGATCGCAT TGAAGATGAA CTTTGTTACT ATGAAGTTAA AAAAATGGAT GGGAATTCTA TAGAGCGTGT TAAGGTGGTT AAAAAAACAA ATAAAGATGA AGAATAA
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Protein sequence | MVVVALALVF LNGFFVLSEF SIVKVRRSKL EEMVKEKKAG AKKALEVTSR LDTYLSACQL GITLSSLALG WIGEPAIAKM LEIPLINLGF STVIIHTMAF IIAFSIITLL HVVLGELVPK SIAIAVADKA VLFIARPLHW FWMLFLPCIK IFDFLAAISL KLFGIKPAKE SELTHSEEEI KIIASESQKG GVLDEFETEI IRNAVDFSDT VAKEIMTPRK DMICLNKQKS YEENMQIICE HKHTRFPYID GSKDTILGMI HIRDIIQNEL NHKSQNLDTF VKPLILVPEN ISISKVLVMM NKELSHTALV VDEYGGTAGI LTMEDIMEEI IGEIKSEHEE DSYKKLAENI YEFQGRCDIE TVEEMLVINY DEDLEQVTIG GYVFNLLGRL PMVGDRIEDE LCYYEVKKMD GNSIERVKVV KKTNKDEE
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