Gene CJE0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCJE0048 
SymbolmnmA 
ID3230811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni RM1221 
KingdomBacteria 
Replicon accessionNC_003912 
Strand- 
Start bp67407 
End bp68423 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content33% 
IMG OID637291411 
ProducttRNA-specific 2-thiouridylase MnmA 
Protein accessionYP_178073 
Protein GI57237061 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.371916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTC TAGTCGCTAT GAGCGGTGGA GTTGATAGTA CAGTCACTGC TTATAAACTT 
AAAAATTTAG GTCATGAAGT TATAGGTTGT TATATGAAAC TTCATGGCAA ACCAAATTAT 
CACGAAGAAA ATATCAAAAA AGTAGAAAAA GTTGCAAACT TTTTGCAAAT TCCTTATCAT 
ATTTTAGACT TACAAGAAGA TTTTAAAAAC AAAGTTTACA TGCCTTTTGT GGATACTTAT 
AAAGAGGGTA AAACACCAAA TCCTTGCGCT TTATGTAACC GTTTTATCAA ACTTGGAAAA 
CTTTTAGAAT TTGCTAAAAG TTTAGGTTGT GAAAAACTTG CCACAGGGCA TTATGCAAGA 
CTTGAAAACA ACTTAATAAA AACCGCAGTA GATGAAAGCA AGGATCAAAG CTATTTTTTG 
GCCAGTGCAG ATAAAGAAGC TTTAAAATAT CTTATTTTTC CGCTAGGCGA AATGAAAAAA 
GAAGATGTGA AAAAATTTGC TTCCACTATA GAGGTTTTAA AATCTTTTGC CACCCAAAAG 
GAAAGTTCTG AAATTTGCTT TGTTGAAGAT ACTTATGTGC AAGTTTTAGA TCAGTTTATG 
GATACAAAAA TTCCTGGAGA AGTATTAGAT AGTAGCGGAA AAGTAGTAGG CAAACATGAG 
GGCTATATGC ACTATACCAT AGGCAAAAGA AGAGGTTTTG AAGTGCGTGG AGCACATGAG 
CCACATTTTG TTTTAAAAAT CAATCCTAAG CAAAATCAAA TCATCGTAGG AACAAAAGAA 
GAGCTTAAAA TCAGTGAATT TAACCTAAAA AATATCAATC TTTTTATAGA CGCTAAAGAG 
CTTGATTGCG AAGTAAAAAT CCGCTATCGT TCAAAATCCA CACCTTGCAA GGTAGAAATT 
TATGAAGATA AAAGTGCAAA AATCATCCTA AAAGATCCTG TTTATGGGCT TGCTAGCGGA 
CAAATGGCAG TCTTTTATGA TCATGATAAA GTCATAGCAA GTGGTTTTAT AGAATAA
 
Protein sequence
MKILVAMSGG VDSTVTAYKL KNLGHEVIGC YMKLHGKPNY HEENIKKVEK VANFLQIPYH 
ILDLQEDFKN KVYMPFVDTY KEGKTPNPCA LCNRFIKLGK LLEFAKSLGC EKLATGHYAR 
LENNLIKTAV DESKDQSYFL ASADKEALKY LIFPLGEMKK EDVKKFASTI EVLKSFATQK 
ESSEICFVED TYVQVLDQFM DTKIPGEVLD SSGKVVGKHE GYMHYTIGKR RGFEVRGAHE 
PHFVLKINPK QNQIIVGTKE ELKISEFNLK NINLFIDAKE LDCEVKIRYR SKSTPCKVEI 
YEDKSAKIIL KDPVYGLASG QMAVFYDHDK VIASGFIE