Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE0034 |
Symbol | |
ID | 3230798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | - |
Start bp | 51656 |
End bp | 52858 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637291399 |
Product | Bcr/CflA subfamily drug resistance transporter |
Protein accession | YP_178061 |
Protein GI | 57237049 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.276652 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAAC ACACCAAAAT TCACGGCTTT GCTAAATTTA AACTCATCGT TATCCTTGCC TTGATGTCAA GCATAGCACC ACTTTCTACA GATATGTATT TGCCTGCACT TTCTCATGTG GAGCAAAGTT TTCAAACTAA TTCTTTTTTA ACCCAACTTA GTATCGCAAG TTTTTTTATC GCTTTTGCTT TAGGACAGCT TATATATGGG CCTTTAAGTG ATATTTTTGG GCGTAAAATT CCAGCTTTGG TGGGGATATT TTTCTTCATC GTTTCGAGTT TGTTTTGTGT GATTATCGAT GATATTTATG CTTTTATCGC TTTGAGATTT TTTGAAGCAC TTGGGGGTTG TGCAGGTGTG GTTATCGCAA GGGCTATTGT CAATGACTTG TTTGAGATCA AAGAAGCTGC AGGGATTTTT GCTTTGATGA TGGTTTTTAG TTCTCTTGCT CCTATGCTTT CGCCAACTTT TGGGGGAATT TTGCTAGAGT ATTTTTCATG GCATAGTATT TTTGCGACTT TGTTTGCTTT AGGAATTTTA CTTTTTTTGA TGATACTTTT TGGTTTAAAA GAGTCCGCAC CTCATCTTAA AAACAAAAAA TTTTCCCATC ATGAAGCGAT GAAAAGCTAC AAATTTGTTT TAAGCGATAA ACGCTTTTTA GTTTATATAC TATGTGCTTC TTTTGCTTTG GCGGCGATGT TTGCTTATAT CACAGGATCA AGCTTTGTTT TTACGCAGTT TTTTAGCTTA AGTGAGCAAA AATTTGCTTT GCTTTTTGGG GCAAATGCTT TAGGTTTTGT CGTCTGTGCA AATATCAATG CAAGATTGGT TTTAAAATAC GAAAGCGAAA AAATTTTGGC AAAAGCTTTG ATGATAATGT TTATATCGAC TGTGATTTTA CTTGCAAATG CCTTTTTTCA CCCAAATTTC TTGCTTTTTG AACTTAGTAT TTTTACAAGT ATCGCTATGC TTGGTTTCAT CGCACCCAAT ACCACGACTT TGGCTATGGC AAGGTTTAAA GAACATAGCG GAACTGCTTC TGGGGTGCTT GGAACGGTGC AATTTGGTTT TGCAGGGCTT ATTTCTTTTG TGGTTGGGGC TATTAACGCA AATACGCCGA TAATCCTTGC TTTTGTAATG TGTGCTTGCG TATTGGTTGC AAATATGATA TATTTTCTAA TCAAAATAAA GGAGAAAAAA TGA
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Protein sequence | MQKHTKIHGF AKFKLIVILA LMSSIAPLST DMYLPALSHV EQSFQTNSFL TQLSIASFFI AFALGQLIYG PLSDIFGRKI PALVGIFFFI VSSLFCVIID DIYAFIALRF FEALGGCAGV VIARAIVNDL FEIKEAAGIF ALMMVFSSLA PMLSPTFGGI LLEYFSWHSI FATLFALGIL LFLMILFGLK ESAPHLKNKK FSHHEAMKSY KFVLSDKRFL VYILCASFAL AAMFAYITGS SFVFTQFFSL SEQKFALLFG ANALGFVVCA NINARLVLKY ESEKILAKAL MIMFISTVIL LANAFFHPNF LLFELSIFTS IAMLGFIAPN TTTLAMARFK EHSGTASGVL GTVQFGFAGL ISFVVGAINA NTPIILAFVM CACVLVANMI YFLIKIKEKK
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