Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJE0008 |
Symbol | gltD |
ID | 3230664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni RM1221 |
Kingdom | Bacteria |
Replicon accession | NC_003912 |
Strand | + |
Start bp | 12642 |
End bp | 14087 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637291371 |
Product | glutamate synthase subunit beta |
Protein accession | YP_178037 |
Protein GI | 57236922 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAATG CAAGAGGTTT TTTAGACTTT AAAAGAATGG ATTTTAAAAA AATTGCTCCT AAGGAAAGGG TTTTAAATTT CAAAGAATTT ACTATACCTT TGGATAAAAA AGAACAAGAA ATTCAAGGTG GACGATGTAT GGATTGTGGT GTGGCCTTTT GTCATACGGG TGTGATGAGC GAAGGAAAAG ATGTGGGCTG TCCTTTAAAC AATCTCATTC CTGAATGGAA CGATCTTGTT TATCGTTCTT TATGGAAAGA AGCTTATGAA AGACTTGATC TTACCAATCC TTTTCCTGAA TTTACCGGTC GTGTTTGCCC TGCTCCTTGT GAGGATTCTT GTGTGTGTGC GATAAATGGT GTTAGTGTGA GCATAAAAAA TAATGAATTA TCCATTATAG AAAATGCTTT TAAGGAAAAT TTAGTAAGAG TAAATAAACC TAAGCAATAC AATGGCAAAA AAATCGCTGT CATAGGAAGT GGGCCTGCTG GTCTTGCTTG TGCTAATACT TTAAATTCAC TAGGTTATAA AGTAAGTGTT TTTGAAAGAA GCGATAAAAT AGGCGGACTT TTGATGTATG GCATCCCTGA TATGAAGCTT GATAAAAGTA TAGTTCAAAG ACGGGTGGAT TTGCTTAAAA AAAGTGGGAT TGAATTTAAA GTGAATGAAA ATATAGACAG CAGAGATAAG GTTTCAAAAC TTCTAAAAGA ATTTGATGCT TTGGTGCTTT GTACAGGAGC AAGTAAGCCT ATAGATCTTG ATATAGAAGG TAGAAAGCTA AAAGGGGTTG AATTTGCCCT TGATTTTTTA ACGCAAAATA CCAAAACTTT GTTAAAAACA GGCAAGGGTG CAGATACGGC CAAAGGTAAA AATGTCTTGG TTATAGGAAG CGGGGATACA AGTGTGGATT GTATCGCTGT AGCGACAAGA CAAGGGGCTA AATCTATAGT GCGTTTTGAA AGAAGTCCAA AAAGACCTTT GCAAAGAAGC CAAAACAATC CTTGGCCTTT AAAAGCTGAC ATTTTTACTA CTGATTATGG TTTAGAAGAA GCCATTGCTG TATATGGCAA AGATCCTAGG GAATATCAAA AAATGACAAA GAAATTTTTA GGAAAAACTC ATGTAGAAGG TGTTGAAGCA AATGATTTAA AACGCGAGTT TAAAGAAGGC AAAGCTATAA ATGTCGAAAT TTCAAATTCT AAAAAAACTT ATAAAGCGGA TTTAGTGCTT TTAGCTATGG GTTTTAGCGG GTGCGAAGAA GCTATCTCTA AAAATTTTGG AGTGAAATTA GATGAGAAAA ACAACATAAG CACAGAAAAT TTCCAAACCA CTCATAAAAA AATCTTTGCT TGTGGAGATG CTAGAAAAGG ACAATCTTTA GTTGTTTGGG CTATAAAAGA TGGTATAGAA TGTGCTTTGA GTTTGCATCA AAATTTAGCA AAATAA
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Protein sequence | MGNARGFLDF KRMDFKKIAP KERVLNFKEF TIPLDKKEQE IQGGRCMDCG VAFCHTGVMS EGKDVGCPLN NLIPEWNDLV YRSLWKEAYE RLDLTNPFPE FTGRVCPAPC EDSCVCAING VSVSIKNNEL SIIENAFKEN LVRVNKPKQY NGKKIAVIGS GPAGLACANT LNSLGYKVSV FERSDKIGGL LMYGIPDMKL DKSIVQRRVD LLKKSGIEFK VNENIDSRDK VSKLLKEFDA LVLCTGASKP IDLDIEGRKL KGVEFALDFL TQNTKTLLKT GKGADTAKGK NVLVIGSGDT SVDCIAVATR QGAKSIVRFE RSPKRPLQRS QNNPWPLKAD IFTTDYGLEE AIAVYGKDPR EYQKMTKKFL GKTHVEGVEA NDLKREFKEG KAINVEISNS KKTYKADLVL LAMGFSGCEE AISKNFGVKL DEKNNISTEN FQTTHKKIFA CGDARKGQSL VVWAIKDGIE CALSLHQNLA K
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