Gene CJE0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCJE0008 
SymbolgltD 
ID3230664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni RM1221 
KingdomBacteria 
Replicon accessionNC_003912 
Strand
Start bp12642 
End bp14087 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content35% 
IMG OID637291371 
Productglutamate synthase subunit beta 
Protein accessionYP_178037 
Protein GI57236922 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases 
TIGRFAM ID[TIGR01317] glutamate synthases, NADH/NADPH, small subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAATG CAAGAGGTTT TTTAGACTTT AAAAGAATGG ATTTTAAAAA AATTGCTCCT 
AAGGAAAGGG TTTTAAATTT CAAAGAATTT ACTATACCTT TGGATAAAAA AGAACAAGAA
ATTCAAGGTG GACGATGTAT GGATTGTGGT GTGGCCTTTT GTCATACGGG TGTGATGAGC
GAAGGAAAAG ATGTGGGCTG TCCTTTAAAC AATCTCATTC CTGAATGGAA CGATCTTGTT
TATCGTTCTT TATGGAAAGA AGCTTATGAA AGACTTGATC TTACCAATCC TTTTCCTGAA
TTTACCGGTC GTGTTTGCCC TGCTCCTTGT GAGGATTCTT GTGTGTGTGC GATAAATGGT
GTTAGTGTGA GCATAAAAAA TAATGAATTA TCCATTATAG AAAATGCTTT TAAGGAAAAT
TTAGTAAGAG TAAATAAACC TAAGCAATAC AATGGCAAAA AAATCGCTGT CATAGGAAGT
GGGCCTGCTG GTCTTGCTTG TGCTAATACT TTAAATTCAC TAGGTTATAA AGTAAGTGTT
TTTGAAAGAA GCGATAAAAT AGGCGGACTT TTGATGTATG GCATCCCTGA TATGAAGCTT
GATAAAAGTA TAGTTCAAAG ACGGGTGGAT TTGCTTAAAA AAAGTGGGAT TGAATTTAAA
GTGAATGAAA ATATAGACAG CAGAGATAAG GTTTCAAAAC TTCTAAAAGA ATTTGATGCT
TTGGTGCTTT GTACAGGAGC AAGTAAGCCT ATAGATCTTG ATATAGAAGG TAGAAAGCTA
AAAGGGGTTG AATTTGCCCT TGATTTTTTA ACGCAAAATA CCAAAACTTT GTTAAAAACA
GGCAAGGGTG CAGATACGGC CAAAGGTAAA AATGTCTTGG TTATAGGAAG CGGGGATACA
AGTGTGGATT GTATCGCTGT AGCGACAAGA CAAGGGGCTA AATCTATAGT GCGTTTTGAA
AGAAGTCCAA AAAGACCTTT GCAAAGAAGC CAAAACAATC CTTGGCCTTT AAAAGCTGAC
ATTTTTACTA CTGATTATGG TTTAGAAGAA GCCATTGCTG TATATGGCAA AGATCCTAGG
GAATATCAAA AAATGACAAA GAAATTTTTA GGAAAAACTC ATGTAGAAGG TGTTGAAGCA
AATGATTTAA AACGCGAGTT TAAAGAAGGC AAAGCTATAA ATGTCGAAAT TTCAAATTCT
AAAAAAACTT ATAAAGCGGA TTTAGTGCTT TTAGCTATGG GTTTTAGCGG GTGCGAAGAA
GCTATCTCTA AAAATTTTGG AGTGAAATTA GATGAGAAAA ACAACATAAG CACAGAAAAT
TTCCAAACCA CTCATAAAAA AATCTTTGCT TGTGGAGATG CTAGAAAAGG ACAATCTTTA
GTTGTTTGGG CTATAAAAGA TGGTATAGAA TGTGCTTTGA GTTTGCATCA AAATTTAGCA
AAATAA
 
Protein sequence
MGNARGFLDF KRMDFKKIAP KERVLNFKEF TIPLDKKEQE IQGGRCMDCG VAFCHTGVMS 
EGKDVGCPLN NLIPEWNDLV YRSLWKEAYE RLDLTNPFPE FTGRVCPAPC EDSCVCAING
VSVSIKNNEL SIIENAFKEN LVRVNKPKQY NGKKIAVIGS GPAGLACANT LNSLGYKVSV
FERSDKIGGL LMYGIPDMKL DKSIVQRRVD LLKKSGIEFK VNENIDSRDK VSKLLKEFDA
LVLCTGASKP IDLDIEGRKL KGVEFALDFL TQNTKTLLKT GKGADTAKGK NVLVIGSGDT
SVDCIAVATR QGAKSIVRFE RSPKRPLQRS QNNPWPLKAD IFTTDYGLEE AIAVYGKDPR
EYQKMTKKFL GKTHVEGVEA NDLKREFKEG KAINVEISNS KKTYKADLVL LAMGFSGCEE
AISKNFGVKL DEKNNISTEN FQTTHKKIFA CGDARKGQSL VVWAIKDGIE CALSLHQNLA
K