Gene CPS_5047 details

Gene Information

• Locus tag: CPS_5047
• Symbol: gidA
• ID: 3519949
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: -
• Start bp: 5365524
• End bp: 5367413
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637287486
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_271685
• Protein GI: 71279490
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.018834
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGGTATC AAGAGTCTTA TGACGTAATT GTTGTTGGTG GTGGTCATGC GGGAACCGAG 
GCCTCACTTG CTGCTGCGCG TATGGGCTGC AAAACTTTGT TGTTAACCCA TAACATTGAC 
ACGCTAGGCC AAATGTCTTG TAACCCCGCC ATTGGCGGTA TCGGCAAAGG TCATTTGGTT 
AAAGAAATTG ATGCACTGGG TGGTTTGATG GCAACAGCCA TTGATCATAG TGCCATTCAA 
TTTAGAACAT TAAATTCGAG CAAAGGACCT GCAGTGAGGG CAACTCGTGC TCAAGCAGAT 
CGCATTTTAT ATCGTAACTA TGTTCGTAAT ACGTTGGAAA ACCAAGAAAA TTTAACTATT 
TTCCAACAGC CCTGTGATGA CTTGATCCTT GAAAACGATC GTGTTGTCGG TGTATCGACA 
CAAATGGGCC TTAAATTTAA AGGTAAAAGC GTAGTACTTA CGGTAGGTAC TTTTCTTTCA 
GGGCTTATTC ACATTGGCTT GAATAACTAC CAAGGTGGAA GAGCAGGTGA TCCTGCCAGT 
GTAAATCTAG CAGCAAAAAT GCGAGATATG CCGTTTAGAA TGGATCGTTT AAAAACGGGT 
ACTCCACCTA GGTTAGACGC AAGATCATTA GATTTTTCTG TTATGGAAGA GCAAGCAGGT 
GATACACCTA GTCCAGTATT TTCTTTCATG GGATCACAGG CGGATCATCC AGAACAAATA 
TCTTGTTTTA TCACACATAC CAACGAGCAA ACCCATCAAC ACATTCGAGA TGGTTTAGAT 
CGATCTCCAA TGTATACTGG CGTAATTGAA GGTGTGGGTC CAAGATATTG TCCGTCTATT 
GAAGACAAAA TCACCCGCTT TGCAGATAAA AGTTCACATC AAATATTTGT TGAACCTGAA 
GGTTTGACTA CTCATGAAGT GTATCCAAAC GGTATTTCAA CCAGTTTACC TTTTGATGTA 
CAAATGAATT TAGTACGTTC AATCAAAGGC TTTGAAAACG CTTTTATTAC TCGTCCTGGT 
TATGCCATTG AATATGACTA CTTCGATCCT CGTGACTTAA AACAAAGTTT AGAAAGTAAA 
TTCGTTCAAA ATTTATATTT TGCCGGACAA ATTAATGGCA CCACAGGTTA TGAAGAAGCC 
GGTGCTCAAG GACTCATCGC TGGAGCTAAT GCTGCAAATA GAGTTAAAGA GCGTGATGAG 
TTCACTCTTG GTAGAGATCA AGCTTACATG GGCGTGTTAA TTGATGATTT AGCAACGCTA 
GGTACGAAAG AACCTTATCG TATGTTTACT TCTCGTGCTG AATACCGTTT ATTGCTTCGT 
GAAGACAACG CTGATATTCG TTTAACAGAG CAAGGTCGTA AAATTGGTTT AGTTGGTGAT 
ACTCGTTGGC AGCGATTTAA TGAGAAGATG GAAAACGTTG AACTTGAACG TCAGCGCTTA 
CGATCTACTT GGGTACAAAA GGATCATACA AAAATAGATC AAATCAATGC CTTGCTGAAA 
ACACCAATGA GCAAAGAAGC GAGTTTAGAA GACTTAATTC GTCGTCCAGA AGTAAACTAT 
ACCGATCTAA TGAAGATCGA AGGTTTGGGG CCAGCGATAG AAGATAGTCA AGCTTCTGAG 
CAAATTGAAA TTCAAACTAA ATATGCAGGT TACATCGACA GACAGTTAGA TGAAATAGCC 
AAGAAAAAAC GTAATGAAGA TACTAAAATC CCGAGAGATT TTGATTATCA ACAAATTTCA 
GGCCTATCTA ACGAAGTTGT AGCCAAGTTA AAAGATGCTT GTCCAGAAAC TATTGGTAAA 
GCTTCACGAA TTTCTGGTAT TACTCCGGCG GCAATTTCGT TATTATTAGT CTACTTAAAA 
AAACACGGTC TTTTACGCAA ATTAGCGTAA 

 

Protein sequence

MWYQESYDVI VVGGGHAGTE ASLAAARMGC KTLLLTHNID TLGQMSCNPA IGGIGKGHLV 
KEIDALGGLM ATAIDHSAIQ FRTLNSSKGP AVRATRAQAD RILYRNYVRN TLENQENLTI 
FQQPCDDLIL ENDRVVGVST QMGLKFKGKS VVLTVGTFLS GLIHIGLNNY QGGRAGDPAS 
VNLAAKMRDM PFRMDRLKTG TPPRLDARSL DFSVMEEQAG DTPSPVFSFM GSQADHPEQI 
SCFITHTNEQ THQHIRDGLD RSPMYTGVIE GVGPRYCPSI EDKITRFADK SSHQIFVEPE 
GLTTHEVYPN GISTSLPFDV QMNLVRSIKG FENAFITRPG YAIEYDYFDP RDLKQSLESK 
FVQNLYFAGQ INGTTGYEEA GAQGLIAGAN AANRVKERDE FTLGRDQAYM GVLIDDLATL 
GTKEPYRMFT SRAEYRLLLR EDNADIRLTE QGRKIGLVGD TRWQRFNEKM ENVELERQRL 
RSTWVQKDHT KIDQINALLK TPMSKEASLE DLIRRPEVNY TDLMKIEGLG PAIEDSQASE 
QIEIQTKYAG YIDRQLDEIA KKKRNEDTKI PRDFDYQQIS GLSNEVVAKL KDACPETIGK 
ASRISGITPA AISLLLVYLK KHGLLRKLA