| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4986 |
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| Symbol | prlC |
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| ID | 3522558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 5301377 |
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| End bp | 5303428 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637287425 |
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| Product | oligopeptidase A |
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| Protein accession | YP_271625 |
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| Protein GI | 71282086 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAATC CATTATTAGT ATCTAGCGAA CTACCTGCCT TTTCAAAAAT TAAGCCTGAA
CATGTAAAAC CTGCTGTTGA GCAATCAATT AAAGATTGCA AAAAAATTAT TGAGCAAGTT
CTCGCTAATG ATGATGTCTT TACTTGGGAT AATTTAGTAT TACCCATTGA TGAAGTTGAT
GATGTGCTAT CTAAACTTTG GTCACCTGTT TCCCATATGA ATTCAGTTGT GAGTAGTGAT
GCATTGCGTG ATGCGTATGA GTCTTGTCTG CCCCTTTTAT CTGAATATGG CACCTTTGTT
GGTCAACATG AAGGTTTATA TCAAGCCTAC CTTAGCGTTA AAAACAGTAA GCAATTTGAA
CAGCTCGACG TAGCTCAACA AAAAGTTATC ACGAATGCCC TTCGTGATTT TAAACTATCA
GGTATTGCTT TAAGTGATAA TGATAAGAAG CGTTATGGTG AAATAGCGAC TCGCTTATCA
GAACTCAGCT CTAGTTTTAG CAATAATGTG CTCGATGCTA CCCATGCCTT TAGTATTACC
ATTGAAGACG AAAAAGAGCT TACCGGCTTG CCGAAGAGTG CTTTAGCGGC GGCAAAAGAA
CTTGCCACAG CAAAAGAGCA ACAGGGGTTT ACTTTTACTC TTGATATTCC AAGTTATCTA
CCGGTAATGA TGTATTGTGA TAATGCTGAT TTACGTGAGC AACTTTATAC GGCATTTGTT
ACTCGTGCGT CAGACCAGGG GCCTAATGCA AATAAATTTG ATAATAGCGC CATCATGGAT
GAGTTACTAA GCTTGCGACA TGAATTAGCT AATTTACTTG ATTTTGACAA CTATGCTCAA
CATTCATTAA CCACTAAAAT GGCCAATACC ACGAGTGAAG TCATGGCGTT TCTTGAAAAC
TTAGCCATTA AATCACAACA CCAAGGTAAA CGAGACTTTA AAGAACTAAG CGACTTTGCT
GCGACTGAAT TCAAGAAAGA TAATTTACAG GCTTGGGATC TGGCTTATTA CAGCGAAAAG
TTAAAACAAA GTCGTTACGC CATTTCAGAT GAACAATTAC GCCCATATTT TCCTAAAGAC
AAAGTTGTTT CTGGTCTATT TGCAGTGGTC CATAAGTTAT TTGGCCTATC TATCAAACAT
CGTGAAGGTG TTGATGTATG GCATGACGAT GTTAACTTTT ATGATGTATT TGATAAATCA
GGTGAAAGAC GAGGCAGCTT TTATCTTGAC CTTTATGCCC GCGAGAAAAA ACGTGGTGGA
GCTTGGATGG ATGACTGTGT TGGTCGAAGC CAGCTAGCTG ATGGGTCTAT TCAATATCCA
GTTGCCTATT TAACGTGTAA TTTTAACGGC CCTGTAGGCA ATCAACCGGC ATTATTTACC
CATGATGAAG TTGTTACCTT ATTCCATGAG TTTGGTCATG GCATTCATCA CATGTTAAGC
CAAATAAACG CCAGCAGTGT TGCCGGTATT AATGGCGTTC CTTGGGATGC AGTAGAACTT
CCTAGTCAAT TTTTAGAAAA CTGGTGTTGG CAACCCGAAG CACTTGCGTT TATTTCAGGC
CATTTTGAAA GTGGTGAGTC ATTGCCTCAA GAAATGTTAA CCAAAATGTT GGCGGCAAAG
AATTTCCAAT CAGCGATGCA AATGTTGCGT CAGATTGAGT TCAGCATCTT TGATTTCACT
ATGCATGAAA GCTATAACCC CAATGCATTG AATAATGAAA AACATATTCA ACAAGTGCTC
GATAATGTTA GAACCAAGTA CTCTGTAGTA ACAGCGCCTG AATTTAATCG TTTTCAACAT
GGTTTTAGCC ACATCTTTGG CGGTGGTTAT TCAGCAGGTT ACTACAGCTA CAAGTGGGCT
GAAGTATTAT CCGCTGACGC ATTTGGTTTA TTTGAAGAGC AAGGCATCTT CAATGAAGAA
ACCGGTCAGT CATTCTTAAA CAATATTTTA GAAAAAGGCG GCAGCGAAGA GCCAAGCGTG
TTGTTTAAAA ACTTCAGAGG CAGAGCACCA GAAATTGATG CGCTATTGCG TCACTGTGGT
ATTGAAGCGT AA
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| Protein sequence | MTNPLLVSSE LPAFSKIKPE HVKPAVEQSI KDCKKIIEQV LANDDVFTWD NLVLPIDEVD
DVLSKLWSPV SHMNSVVSSD ALRDAYESCL PLLSEYGTFV GQHEGLYQAY LSVKNSKQFE
QLDVAQQKVI TNALRDFKLS GIALSDNDKK RYGEIATRLS ELSSSFSNNV LDATHAFSIT
IEDEKELTGL PKSALAAAKE LATAKEQQGF TFTLDIPSYL PVMMYCDNAD LREQLYTAFV
TRASDQGPNA NKFDNSAIMD ELLSLRHELA NLLDFDNYAQ HSLTTKMANT TSEVMAFLEN
LAIKSQHQGK RDFKELSDFA ATEFKKDNLQ AWDLAYYSEK LKQSRYAISD EQLRPYFPKD
KVVSGLFAVV HKLFGLSIKH REGVDVWHDD VNFYDVFDKS GERRGSFYLD LYAREKKRGG
AWMDDCVGRS QLADGSIQYP VAYLTCNFNG PVGNQPALFT HDEVVTLFHE FGHGIHHMLS
QINASSVAGI NGVPWDAVEL PSQFLENWCW QPEALAFISG HFESGESLPQ EMLTKMLAAK
NFQSAMQMLR QIEFSIFDFT MHESYNPNAL NNEKHIQQVL DNVRTKYSVV TAPEFNRFQH
GFSHIFGGGY SAGYYSYKWA EVLSADAFGL FEEQGIFNEE TGQSFLNNIL EKGGSEEPSV
LFKNFRGRAP EIDALLRHCG IEA
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