| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4973 |
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| Symbol | spoT |
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| ID | 3519239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 5282834 |
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| End bp | 5284945 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637287412 |
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| Product | guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase |
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| Protein accession | YP_271612 |
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| Protein GI | 71279271 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.615234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTACTTAT TTGAACCTTT AAAAGAACTT AGCTCTACTT ATCTATCAAA AGTACAAATT
GATTTGCTTA AACACGCTTA TGTTGTTGCG CGTGATGCCC ATGATGGCCA GATGCGATCC
AGTGGTGACC CTTATATTAC TCACCCCGTT GCTGTAGCTA TTAATTTAGC GCAAATGAAT
CTAGACCATG AAACCCTCAT GGCGGCGTTA TTACACGATG TTATTGAAGA CACCGAAGTA
ACCAAAGATG AATTAGCTGA ACTTTTTGGT CATACCGTGG CTGAACTCGT TGAAGGTGTT
AGTAAACTCG ATAAACTTAA ATTTAATAAC AAAGAAGAAA TGCAAGCGGA GAACTTCCGT
AAGATGGTAC TTGCCATGGT GCAAGATATC CGAGTTATTT TAATCAAGCT TGCCGATCGT
ACCCATAATA TGCGTACCTT AGGCTCTTTA CGACCAGATA AGCGTCGACG TATTGCTCGC
GAAACGTTAG AGATTTATGC ACCAATAGCT AACCGTCTAG GTATTCATGA TATAAAAAAT
GAATTAGAAC TTCTCGGCTT TGAAGCGCTT TACCCCATGC GTTCTCGCGC TTTAAAATCT
GCAGTACAAA GTGCCCGCGG TAATCGTAAA GCTATTATTG ATAACATTGA AAAAGAAATT
GCTGCACGTT TGGCCGAAAG CGGTATTGAC GCGCAAATTA TAGGCAGAGA AAAGCACCTT
TATTCAATTT ATCGTAAAAT GCTAAATAAA GAATTAATGT TCAATGAAGT GATGGATATC
TATGCTTTTC GCGTTATCGT GCATGATAAA ATTGATAACT GCTACCGCGC GTTAGGTGCT
ATGCACAACC TATTCAAGCC GATTGAAACA CGCTTTAAAG ATTATATCGC CATCCCTAAA
ACTAATGGTT ATCAATCACT GCACACCTCG TTAATTGGTC CGCATGGCAT TCCAGTAGAA
ATTCAAATCC GTACCCATGA TATGGACCAA ATGGCCGACA AAGGTGTTGC TGCTCATTGG
TTATACAAAC AAGATGGTGA CAACACGGGT ACAACGGCGC AAATGAAAGC CCGTCGTTGG
ATGCAAAGTT TATTAGAGCT ACAACAAAGT GCAGGCAGCT CTTTCGAGTT TATTGAAAAC
GTTAAGTCTG ACTTATTTCC TGAAGAAATT TATGTCTTCA CTCCGGACGG CCGTATTATT
GAGCTACCAA TGGGCGCAAC CGCAATCGAT TTTGCTTATG CAGTGCACAC TGATGTTGGT
AATTCTTGTG TCGGCGTTAA GGTTGATCGC AAACCTTATC CTATGAGCCG ACCCATTGAC
TCTGGCCAAA CCATTGAAGT AATAACGTCA GCATCAGCAA GGCCTAATGC AACTTGGTTA
AACTTTGTCG TTACCGCTAA AGCTCGCTTA CAAATCAGAA CTTATTTAAG AAGCTGTGAA
AAAAATGAAT CTCATGCTTT AGGTTTGCGT TTGTTAAGTC ACGCCCTCGG TAAAACTAAA
CTTGTAGATC TAGCACAAGA AAAAATTGAT GAAGTAGTGC AACAAAGTGG CAATAGTACT
TTTGAAGAAT TATTGACGAA TATCGGTTTA GGTAATGCCT TGAGTATCGG TATTGCTAGA
CAATTAACCG ATGGTTTTAC TGAAGACAAT GAATTAACAT CGACTACCAG CCCCAAGACC
AAAATGCCGA TAAAGGGTAC CGAAGGCATG TTAGTCAGTT ACGGTAAATG TTGCCGTCCT
ATCCCTGGCG ATGCTATTTT GGCTTACTTA AGCCCGGGTA AAGGTTTAAT GGTGCATCAG
CAAGGTTGTC GAAACATTAA AGGCCACGAC CAAGGCAGCT TATTCCCGGT CAAATGGGAT
AGCGATATTG ATAAAGAGTT TATTGCTAAA TTACGGGTAG AAATCATTAA CCATCAAGGT
GCATTAGCAT TATTAACTAA TGCAGTTGCA AAGTGTGGCT CTAACGTTCA CAACCTAAAT
TCTGGTGAAA AAGAAGCTGG CTTATACGTA ATAGACATGG AAATAACCTG TCGAGATCGT
ATTCATTTAG CGGATATTAT TCGAAAAATT AAAGTCATGA TTGATGTACA ACGCGTCATT
CGAAATAAAT AA
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| Protein sequence | MYLFEPLKEL SSTYLSKVQI DLLKHAYVVA RDAHDGQMRS SGDPYITHPV AVAINLAQMN
LDHETLMAAL LHDVIEDTEV TKDELAELFG HTVAELVEGV SKLDKLKFNN KEEMQAENFR
KMVLAMVQDI RVILIKLADR THNMRTLGSL RPDKRRRIAR ETLEIYAPIA NRLGIHDIKN
ELELLGFEAL YPMRSRALKS AVQSARGNRK AIIDNIEKEI AARLAESGID AQIIGREKHL
YSIYRKMLNK ELMFNEVMDI YAFRVIVHDK IDNCYRALGA MHNLFKPIET RFKDYIAIPK
TNGYQSLHTS LIGPHGIPVE IQIRTHDMDQ MADKGVAAHW LYKQDGDNTG TTAQMKARRW
MQSLLELQQS AGSSFEFIEN VKSDLFPEEI YVFTPDGRII ELPMGATAID FAYAVHTDVG
NSCVGVKVDR KPYPMSRPID SGQTIEVITS ASARPNATWL NFVVTAKARL QIRTYLRSCE
KNESHALGLR LLSHALGKTK LVDLAQEKID EVVQQSGNST FEELLTNIGL GNALSIGIAR
QLTDGFTEDN ELTSTTSPKT KMPIKGTEGM LVSYGKCCRP IPGDAILAYL SPGKGLMVHQ
QGCRNIKGHD QGSLFPVKWD SDIDKEFIAK LRVEIINHQG ALALLTNAVA KCGSNVHNLN
SGEKEAGLYV IDMEITCRDR IHLADIIRKI KVMIDVQRVI RNK
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