Gene CPS_4969 details

Gene Information

• Locus tag: CPS_4969
• ID: 3523294
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 5279182
• End bp: 5279892
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637287408
• Product: hypothetical protein
• Protein accession: YP_271608
• Protein GI: 71278936

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.349038
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACAAAA GCCTTATCAC TAACCTTATT GCATTAGCTT TTACAGTAGG GGGCTATGTT 
AGCGAGCATC ATATTCTTTT CACATTAGGC CTTTTTGCCT TATCTGGCGC CATCACTAAC 
TGGCTTGCTG TGTATATGCT ATTTGAAAAG GTGCCATTAT TGTATGGCTC AGGTGTCATT 
CCTGCGCGTT TTGAAGAGTT CAAAATTGCT ATTCGTCAAT TGATGATGGA ACAATTTTTC 
ACTGAGCAAA ACATTGACCG ATTTCTTTCT GATAGTTCAG GCAAAGCCAG TACCCTTAAT 
TTGGCCCCTG TCATCGAGAA GATTGACCTA TCCCCCGCCT TTGACAGCTT AGTTGCTGTT 
ATTGAAAGTT CTTCTTTTGG TAGCATGCTT GCCATGGTCG GAGGTAGTGA AGCTTTGCAA 
CCTATGAGAG AACCATTTAT TGAGAAGATG AAAATCTCTA TACAAGATAT CGCGCAAAGT 
GAGCAATTTA ATACCTTGTT ACGAGAAGAA TTAGAACAAC CAGATATAAT TTCCGGCATG 
CGGGACAAAG TCAGCGATAT TATTGAAAAA CGTCTTAATG AATTGACCCC TCAATTAGTT 
AAAGAAATAG TTCAAAAAAT GATAAAAAAA CATCTTGGTT GGCTAGTCGT TTGGGGGGGC 
ATATTTGGCG GTGTTATTGG CGTAATTGCT GCGATTACGA ATAATTTTTA G 

 

Protein sequence

MNKSLITNLI ALAFTVGGYV SEHHILFTLG LFALSGAITN WLAVYMLFEK VPLLYGSGVI 
PARFEEFKIA IRQLMMEQFF TEQNIDRFLS DSSGKASTLN LAPVIEKIDL SPAFDSLVAV 
IESSSFGSML AMVGGSEALQ PMREPFIEKM KISIQDIAQS EQFNTLLREE LEQPDIISGM 
RDKVSDIIEK RLNELTPQLV KEIVQKMIKK HLGWLVVWGG IFGGVIGVIA AITNNF