Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4891 |
Symbol | |
ID | 3521943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 5185519 |
End bp | 5186307 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637287330 |
Product | IclR family transcriptional regulator |
Protein accession | YP_271530 |
Protein GI | 71281471 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTAAAG TTAAACCCGA ATCTCGCATT CAAGTAATAG ATAGAGCAGC CACATTACTC GATGCTATTT CACGCTATAC CATGCCGGTA ACACTAAAAG CGCTTAGTGC CGATACTAAT TTAGCGCCAT CTACTGCTTT TCGAATATTA CATTCTCTTA TCGATAATCA CTTTGTTGAT CGAGACAATT CAGGTAAGTA CCAGTTAAGT GGTCGACTCA TTAGACTCAG TAATTATCAA TCTCAACACG TAGATTTTCG CAAAGTGGCA TTACCTTATA TGGAAAAACT ACGAGATAAG TTTGGTGAAA CGATTAACCT CACCACGCGT GAAGGCGATG TGATCATTTA CGTAGAAAAA GCCATTCCCA ATAGAATGAT GCATGTTCAA CAAATTATTG GTAGCCGAGC GCCGCTTCAT GTAACAGGCG TTGGTAAAAT GATGTTAGGC ATGGAAGGCA GCGAAGGAAT TAGTGGTTAT GCCCATCGCA CAAATTTACC AACCTATACT CGTAAAACAT TTTCAGACAT AGAAAGCTTA GAGCGCGAGT GTATGCACTG TGTTGAGCAA GGATTTGCCT ACGATAACGA AGAAGCCGAA ATAGGTGTAG GTTGTATTGG CGTGCTGTTA TATGACAGAT ACGGTGAAGT TGTTGCTGGG TTATCGGTGT CAGCACCGAT AGATAGACGT AAAGATGAAT GGGTCAAACA CTTAGTCAAA GCAGGTAAGT CAATTTCCAT TGAACTTGGC TTTGTTAAAA ACCAACAGCC AATTAAAGAA ACCAGTTAA
|
Protein sequence | MTKVKPESRI QVIDRAATLL DAISRYTMPV TLKALSADTN LAPSTAFRIL HSLIDNHFVD RDNSGKYQLS GRLIRLSNYQ SQHVDFRKVA LPYMEKLRDK FGETINLTTR EGDVIIYVEK AIPNRMMHVQ QIIGSRAPLH VTGVGKMMLG MEGSEGISGY AHRTNLPTYT RKTFSDIESL ERECMHCVEQ GFAYDNEEAE IGVGCIGVLL YDRYGEVVAG LSVSAPIDRR KDEWVKHLVK AGKSISIELG FVKNQQPIKE TS
|
| |