| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4809 |
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| Symbol | pdhR |
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| ID | 3521642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 5101675 |
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| End bp | 5102466 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637287248 |
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| Product | transcriptional regulator PdhR |
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| Protein accession | YP_271448 |
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| Protein GI | 71281171 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACAA ACGTAACGAC AAATAAATCA GTACAAGCAG CCAAAAACAC TGGGCGAGTA
AAACCACAAA AATTAGCTGA TATTATTTTA GCTCAGCTTG AAGGCATGAT AATTGAAGGC
AGTTTACAGC CAGGTGAAAA ATTATTACCT GAGCGTGAAC TTGCTCTGCA ATTTGAAGTC
TCAAGACCAT CATTACGTGA AGCAATACAG AAGTTAGAAG CCAAAGGTTT GGTGACACGT
AAACAAGGTG GGGGCACTTT TGTTTGTAAC AATTTACTCA GCGGTTTTTC TGATCCCTTG
TTTGAATTAA TGTCCAATAA TAATGAATCA CAATTTGATT TATTAGAGTT TCGCCATGGT
ATTGAGGGTA TGGCGTCATA CTACGCTGCT ATGCGTGGTA CACCTGCGGA CTTTGAACAA
ATTCAAGCAA AGCATAATGA AATTGGTAAC AGCCAATTAG AAGATGACTT TCGAGGGGAA
GCTGAAGCCG TTGTTGAGTT TCATTTAGCT ATCTGTGCAG CGTCACATAA TGCGGTAATT
TTACAGCTTG CTCGCAGCAT GTCGTCATTA TTAGCGGATA ATATTGCACA AAATTTAACA
GTATTAGCAA AGCGGCCTGA TATCTTTAGC AAGATTACCG ATTATAGAAA GCGTTTGCTT
GATGCCATTC TCAGTGGCCA ACCCCAAAAA GCTTGGGGAG CAAGCCATAG ACACTTAGCG
TTTATCGAAG AAGTATTATT AAAATCGACA CAAGAAAACA GTCGCATGGA ACGTTCAATG
CGAAGAATGT AG
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| Protein sequence | MNTNVTTNKS VQAAKNTGRV KPQKLADIIL AQLEGMIIEG SLQPGEKLLP ERELALQFEV
SRPSLREAIQ KLEAKGLVTR KQGGGTFVCN NLLSGFSDPL FELMSNNNES QFDLLEFRHG
IEGMASYYAA MRGTPADFEQ IQAKHNEIGN SQLEDDFRGE AEAVVEFHLA ICAASHNAVI
LQLARSMSSL LADNIAQNLT VLAKRPDIFS KITDYRKRLL DAILSGQPQK AWGASHRHLA
FIEEVLLKST QENSRMERSM RRM
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