Gene CPS_4717 details

Gene Information

• Locus tag: CPS_4717
• Symbol: ahpC
• ID: 3519894
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: -
• Start bp: 4993714
• End bp: 4994283
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637287156
• Product: alkyl hydroperoxide reductase, subunit C
• Protein accession: YP_271361
• Protein GI: 71279436
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0450] Peroxiredoxin
• TIGRFAM ID: [TIGR03137] peroxiredoxin

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCAAT CAATTATTAA TACTAAATTA TTACCTTTTA ACGCTACTGC TTTTCACAAC 
GGTGAATTTG TTGAACTAAG TGAAAAAGAC CTTGCGGATA AATGGTCAGT AGTTTTCTTC 
TACCCAGCTG ATTTTACTTT TGTATGTCCT ACCGAATTAG GTGACATGGC AGACCACTAT 
GACGAATTAC AAAAAATGGG CGTTGAAGTT TACTCAGTAT CAACCGATAC CCACTTCACT 
CATAAAGCAT GGCACGACAC CTCAGATACG ATTAACAAAA TCAAATATCC AATGATTGGT 
GATCCAACTG GCGCAATTAC CCGCAATTTT GGTGTCATGA TTGAAGAAGC TGGTTTAGCA 
CTTCGTGGCA CGTTTGTTAT TAATCCAGAA GGCGAAGTTA AAATCGCTGA AGTACATGAC 
TTAGGCATAG GTCGAAGCGC AGCTGAGTTA CTACGTAAAG TTAAAGCAGC ACAATATGTT 
GCTGAGCATG ATGGTGAAGT TTGTCCAGCA GCATGGCAAC CAGGTGCTGA AACTTTAGCT 
CCATCATTAG ACCTAGTAGG CAAAATCTAA 

 

Protein sequence

MNQSIINTKL LPFNATAFHN GEFVELSEKD LADKWSVVFF YPADFTFVCP TELGDMADHY 
DELQKMGVEV YSVSTDTHFT HKAWHDTSDT INKIKYPMIG DPTGAITRNF GVMIEEAGLA 
LRGTFVINPE GEVKIAEVHD LGIGRSAAEL LRKVKAAQYV AEHDGEVCPA AWQPGAETLA 
PSLDLVGKI